Basic Information | |
---|---|
Species | Thellungiella halophila |
Cazyme ID | Thhalv10013913m |
Family | CE8 |
Protein Properties | Length: 362 Molecular Weight: 39781.2 Isoelectric Point: 7.9155 |
Chromosome | Chromosome/Scaffold: 2 Start: 2356653 End: 2358441 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 67 | 350 | 0 |
ITVDQKGGGNFKTINEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFVTLLGQPGSETVLTYHGTAAQYGTVESATLIIWSDYFMAANLIIKNTSPM PKPGSQGQALAMRINGDKAAFYSCKFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAVGDGLRVITAHARESENEQNGYTFVHCKVTG TGTGIYLGRSWMSHPKVIYAFTEMTSVVNPSGWKENLQHGYDKTVFYGEYKCFGPGSHLEKRVPFTQDVDQNEVRPFLTLGYIK |
Full Sequence |
---|
Protein Sequence Length: 362 Download |
MGSISLAIVA FFVAFASPVV LATDTAPIPE DRSQIPEWFK TNVAPYSQRK GTLDPALDAA 60 EASRQVITVD QKGGGNFKTI NEAIKSIPTG NKNRVIIKLA PGVYNEKVTI DIARPFVTLL 120 GQPGSETVLT YHGTAAQYGT VESATLIIWS DYFMAANLII KNTSPMPKPG SQGQALAMRI 180 NGDKAAFYSC KFHGFQDTLC DDKGNHFFKD CYIEGTYDFI FGRGASLYLN TQLHAVGDGL 240 RVITAHARES ENEQNGYTFV HCKVTGTGTG IYLGRSWMSH PKVIYAFTEM TSVVNPSGWK 300 ENLQHGYDKT VFYGEYKCFG PGSHLEKRVP FTQDVDQNEV RPFLTLGYIK GSTWLLPPPK 360 F* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02304 | PLN02304 | 1.0e-89 | 55 | 357 | 313 | + probable pectinesterase | ||
PLN02634 | PLN02634 | 2.0e-90 | 65 | 357 | 302 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 4.0e-96 | 66 | 355 | 290 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-106 | 66 | 357 | 301 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 23 | 361 | 341 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB09012.1 | 0 | 24 | 361 | 26 | 364 | pectin methylesterase-like protein [Arabidopsis thaliana] |
RefSeq | NP_177152.2 | 0 | 1 | 361 | 1 | 361 | PPME1; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_196359.1 | 0 | 24 | 361 | 24 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_196360.1 | 0 | 24 | 361 | 24 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_568181.1 | 0 | 8 | 361 | 9 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4e-39 | 67 | 355 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-35 | 69 | 355 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-21 | 57 | 286 | 26 | 276 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 6e-19 | 66 | 327 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 6e-19 | 66 | 327 | 7 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |