Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10015448m |
Family | CBM43 |
Protein Properties | Length: 495 Molecular Weight: 54375.5 Isoelectric Point: 5.8767 |
Chromosome | Chromosome/Scaffold: 2 Start: 6189815 End: 6191385 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 456 | 3.2e-24 |
WCMLNPNGHSFSNNTNQLGDNVNYACTFSDCTALGYGSSCGNLDEVGNASYAFNMYFQVQNQKAEACDFEGLAMITTRNISREQCN | |||
GH17 | 32 | 348 | 0 |
LGVNWGTMATHQLPPKTVVQMLKDNNVQKVKLFDADTNTMGALAGSGIEVMVAIPNDLLKAMGSYNRAKDWVRRNITRFNDAVKIKYVAVGNEAFLSSYN GSFINLTYPALFNIQKALNEAGVGDFIKATVPLNADVYNSPPENPVPSAGRFRQDIFEEMKLIVNFLAHNKAPFTVNIYPFLSLYLSSDFPFDYAFFNGQ NTVNDNGVIYTNVFDANFDTLLASLRALGHGDMTVIVGEVGWPTDGDKNANIPNAERFYSGLLPKLAGNRGTPMRPGYIEVYLFGFIDEDAKSIAPGNFE RHWGIFRFDGQPKFPAD |
Full Sequence |
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Protein Sequence Length: 495 Download |
MSNHRKQSTT AFIFFCITIS TVSLFSGDVS ALGVNWGTMA THQLPPKTVV QMLKDNNVQK 60 VKLFDADTNT MGALAGSGIE VMVAIPNDLL KAMGSYNRAK DWVRRNITRF NDAVKIKYVA 120 VGNEAFLSSY NGSFINLTYP ALFNIQKALN EAGVGDFIKA TVPLNADVYN SPPENPVPSA 180 GRFRQDIFEE MKLIVNFLAH NKAPFTVNIY PFLSLYLSSD FPFDYAFFNG QNTVNDNGVI 240 YTNVFDANFD TLLASLRALG HGDMTVIVGE VGWPTDGDKN ANIPNAERFY SGLLPKLAGN 300 RGTPMRPGYI EVYLFGFIDE DAKSIAPGNF ERHWGIFRFD GQPKFPADLS GEGKKKILTG 360 AQNVQYLQNQ WCMLNPNGHS FSNNTNQLGD NVNYACTFSD CTALGYGSSC GNLDEVGNAS 420 YAFNMYFQVQ NQKAEACDFE GLAMITTRNI SREQCNFPIQ MGDPTSGHCD HSTRYGSSIV 480 GLGLVSMLLL FVAI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 224 | 340 | 121 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-18 | 370 | 444 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-28 | 370 | 457 | 90 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-77 | 32 | 348 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_176656.1 | 0 | 33 | 461 | 26 | 452 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_179534.1 | 0 | 29 | 461 | 18 | 448 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_187051.3 | 0 | 1 | 494 | 1 | 491 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_197323.1 | 0 | 1 | 494 | 1 | 488 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 13 | 461 | 5 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 32 | 345 | 3 | 310 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3ur8_A | 0 | 32 | 345 | 3 | 310 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3ur7_B | 0 | 32 | 345 | 3 | 310 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 32 | 345 | 3 | 310 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 32 | 345 | 3 | 310 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |