Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10015589m |
Family | AA1 |
Protein Properties | Length: 566 Molecular Weight: 62664.6 Isoelectric Point: 9.184 |
Chromosome | Chromosome/Scaffold: 2 Start: 1554233 End: 1556550 |
Description | laccase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 24 | 548 | 0 |
AKVQHHNFVIQETPVKRLCKTRNAITVNGMFPGPTLEVNNGDTLEVKVLNRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGKSYTYRFTIQGQEGT LWWHAHSSWLRATVYGALIIQPTPGSSFPFPKPDHQTALMLGEWWNANPVDVINQATQTGAAPNISDAYTINGQPGDLYNCSTNETVVVPINSGETSLLR VINAALNQPLFFTVANHKLTVVGADASYLKPFTTTVLMLGPGQTTDVLLTADQPPKRYYIAARAYQSAQNAPFDNTTTTAILQYNKTTTTSPPIVPFLPA FNDTNTVTSFSRKFKSLRNVVVPKTIDDNLVFTIGLGLDNCPKNFPKNRCQGLNGTRFTASMNNVSFVLPSNFSLLQAHSNGIPGVFTTDFPAKPPVKFD YTGNNISRALFQPVKGTKLYKLKYGSRVQVVLQDTSIVTSENHPIHLHGYDFYIVAEGFGNFNPKKDTSKFNLVDPPLRNTVAVPVNGWAVIRFVADNPG VWLMHCHLDVHIKWGLAMAFLVDNG |
Full Sequence |
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Protein Sequence Length: 566 Download |
MTTVHTFSFF MFYFFLFSAS TIIAKVQHHN FVIQETPVKR LCKTRNAITV NGMFPGPTLE 60 VNNGDTLEVK VLNRARYNIT IHWHGVRQMR TGWADGPEFV TQCPIRPGKS YTYRFTIQGQ 120 EGTLWWHAHS SWLRATVYGA LIIQPTPGSS FPFPKPDHQT ALMLGEWWNA NPVDVINQAT 180 QTGAAPNISD AYTINGQPGD LYNCSTNETV VVPINSGETS LLRVINAALN QPLFFTVANH 240 KLTVVGADAS YLKPFTTTVL MLGPGQTTDV LLTADQPPKR YYIAARAYQS AQNAPFDNTT 300 TTAILQYNKT TTTSPPIVPF LPAFNDTNTV TSFSRKFKSL RNVVVPKTID DNLVFTIGLG 360 LDNCPKNFPK NRCQGLNGTR FTASMNNVSF VLPSNFSLLQ AHSNGIPGVF TTDFPAKPPV 420 KFDYTGNNIS RALFQPVKGT KLYKLKYGSR VQVVLQDTSI VTSENHPIHL HGYDFYIVAE 480 GFGNFNPKKD TSKFNLVDPP LRNTVAVPVN GWAVIRFVAD NPGVWLMHCH LDVHIKWGLA 540 MAFLVDNGVG TLETLEAPPL DLPVC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-52 | 32 | 148 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 8.0e-75 | 42 | 543 | 530 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-83 | 24 | 543 | 555 | + oxidoreductase | ||
TIGR03388 | ascorbase | 3.0e-93 | 42 | 543 | 535 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 24 | 565 | 546 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 20 | 565 | 2 | 550 | unknown [Populus trichocarpa] |
EMBL | CBI25418.1 | 0 | 24 | 565 | 31 | 577 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181568.1 | 0 | 14 | 565 | 16 | 580 | LAC5 (laccase 5); laccase [Arabidopsis thaliana] |
RefSeq | NP_196158.1 | 0 | 1 | 565 | 1 | 565 | LAC12 (laccase 12); laccase [Arabidopsis thaliana] |
RefSeq | XP_002315131.1 | 0 | 8 | 565 | 14 | 575 | laccase 90c [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 24 | 543 | 1 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1asq_A | 0 | 24 | 543 | 1 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1asp_B | 0 | 24 | 543 | 1 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1asp_A | 0 | 24 | 543 | 1 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |
PDB | 1aso_B | 0 | 24 | 543 | 1 | 521 | A Chain A, Crystal Structure Of N-terminal Human Ifit1 |