| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10016419m |
| Family | GH14 |
| Protein Properties | Length: 588 Molecular Weight: 67768 Isoelectric Point: 6.5272 |
| Chromosome | Chromosome/Scaffold: 10 Start: 6736552 End: 6738808 |
| Description | beta-amylase 6 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 91 | 509 | 0 |
| YVMLQLGVITNDNVLKNAEKLKKQLKKLKQSQVDGVMVDVWWGIVESKGPKQYQWSAYRDLFEIVQSCGLKLQAIMSFHRCGGNIGDDVNIPIPEWVLEI GDSNPDIFYTNKIGNRNKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDIEVGLGPAGELRYPSYSETQGWVFPGIGEFQCYDKYLR LDYEEEVRRIGHPEWKLPENAGEYNDTPEETGFFEYSDGTYLKEEGKFFLSWYSRKLVLHGDQILDEANKVFLGCKLKLAAKVSGIHWWYKSESHAAELT AGYYNLGNRDGYREIARMMRRHHAILNFTCLEMKNTEQPAKAKSGPQELVQQVLSCGWREGIEVAGENALPRFDRDGYNQIILNARPNGINRDGKPRMFG FTYLRLSDKLLSEPNFATF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 588 Download |
| MTSVLRMMNP NLINGTNLHK GSPILVRAEE SKRRVQWRFS IKQGSLRTPQ ATASSEVSSS 60 TTEPKTMKTQ AREFNTTTYD DKMLTNYVPV YVMLQLGVIT NDNVLKNAEK LKKQLKKLKQ 120 SQVDGVMVDV WWGIVESKGP KQYQWSAYRD LFEIVQSCGL KLQAIMSFHR CGGNIGDDVN 180 IPIPEWVLEI GDSNPDIFYT NKIGNRNKEC LSLSVDNLSL FRGRTAVEMY RDYMKSFREN 240 MEDFISSGVI IDIEVGLGPA GELRYPSYSE TQGWVFPGIG EFQCYDKYLR LDYEEEVRRI 300 GHPEWKLPEN AGEYNDTPEE TGFFEYSDGT YLKEEGKFFL SWYSRKLVLH GDQILDEANK 360 VFLGCKLKLA AKVSGIHWWY KSESHAAELT AGYYNLGNRD GYREIARMMR RHHAILNFTC 420 LEMKNTEQPA KAKSGPQELV QQVLSCGWRE GIEVAGENAL PRFDRDGYNQ IILNARPNGI 480 NRDGKPRMFG FTYLRLSDKL LSEPNFATFK TFLKRMHANQ EYCSEPEMYN HELLPLERSK 540 NNESLEKLME ETKPIDPFPW LEETDMSIRP FESVFSLLRS TFLWNNS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 9.0e-140 | 85 | 517 | 436 | + beta-amylase | ||
| PLN00197 | PLN00197 | 5.0e-150 | 88 | 516 | 433 | + beta-amylase; Provisional | ||
| PLN02905 | PLN02905 | 8.0e-164 | 85 | 517 | 437 | + beta-amylase | ||
| PLN02803 | PLN02803 | 1.0e-171 | 88 | 516 | 432 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 73 | 583 | 518 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1UKP | 0 | 77 | 568 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| GenBank | AAC69949.1 | 0 | 83 | 583 | 1 | 501 | putative beta-amylase [Arabidopsis thaliana] |
| GenBank | AAY40266.1 | 0 | 77 | 568 | 2 | 494 | beta-amylase [Glycine max] |
| DDBJ | BAA09462.1 | 0 | 77 | 568 | 2 | 494 | beta-amylase [Glycine max] |
| RefSeq | NP_180788.2 | 0 | 1 | 583 | 1 | 573 | BAM6 (BETA-AMYLASE 6); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ukp_D | 0 | 77 | 568 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_C | 0 | 77 | 568 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_B | 0 | 77 | 568 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_A | 0 | 77 | 568 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_D | 0 | 77 | 568 | 1 | 493 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 450 | 121 | 568 | 0 |
| HO803971 | 398 | 166 | 561 | 0 |
| HO782669 | 407 | 183 | 587 | 0 |
| EL456360 | 291 | 155 | 445 | 0 |
| GT625519 | 285 | 165 | 449 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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