Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10016439m |
Family | AA1 |
Protein Properties | Length: 574 Molecular Weight: 63621.8 Isoelectric Point: 8.7567 |
Chromosome | Chromosome/Scaffold: 10 Start: 10755766 End: 10758629 |
Description | laccase 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 27 | 555 | 0 |
KAHHHEFIIQATKVKRLCETHNSITVNGMFPGPTLVVNNGDTLVVKVINRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIEGQEGTL WWHAHSSWLRATVYGSILILPPAGSSYPFPNPHRNVPLLLGEWWDANPVDVLRESQRTGAAPNISDAYTINGQPGNLYKCSSQDTTIVPINVGETILLRV INAALNQPLFFTVANHKFTVVGADASYLKPFTTNVVVLGPGQTTDVLITGDQPPNRYYMAARAYQSAQNAPFGNTTTTAILQYKSAPCCTNKGISVKPIM PLLPAYNDTNTVTRFSQSFRSLKRAEVPTEIDENLFVTVGLGLNNCPKNFRSRRCQGPNGTRFTASMNNVSFALPSNYSLLQAHHHNIPGVFTTDFPAKP PVKFDYTGSKISRSLYQPVRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLHGYDFYILAEGFGNFNPKKDTAKFNLEDPPLRNTVGVPVNGWAVIRFV ADNPGVWIMHCHLDAHISWGLAMAFLVED |
Full Sequence |
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Protein Sequence Length: 574 Download |
MEIIKSFLCL ISFTVLLLFT VVVEANKAHH HEFIIQATKV KRLCETHNSI TVNGMFPGPT 60 LVVNNGDTLV VKVINRARYN ITIHWHGVRQ MRTGWADGPE FVTQCPIRPG SSYTYRFTIE 120 GQEGTLWWHA HSSWLRATVY GSILILPPAG SSYPFPNPHR NVPLLLGEWW DANPVDVLRE 180 SQRTGAAPNI SDAYTINGQP GNLYKCSSQD TTIVPINVGE TILLRVINAA LNQPLFFTVA 240 NHKFTVVGAD ASYLKPFTTN VVVLGPGQTT DVLITGDQPP NRYYMAARAY QSAQNAPFGN 300 TTTTAILQYK SAPCCTNKGI SVKPIMPLLP AYNDTNTVTR FSQSFRSLKR AEVPTEIDEN 360 LFVTVGLGLN NCPKNFRSRR CQGPNGTRFT ASMNNVSFAL PSNYSLLQAH HHNIPGVFTT 420 DFPAKPPVKF DYTGSKISRS LYQPVRGTKL YKLKYGSRVQ IVLQDTGIVT PENHPIHLHG 480 YDFYILAEGF GNFNPKKDTA KFNLEDPPLR NTVGVPVNGW AVIRFVADNP GVWIMHCHLD 540 AHISWGLAMA FLVEDGKGLL ETMEEPPADL PVC* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam07732 | Cu-oxidase_3 | 4.0e-53 | 35 | 150 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. |
PLN02191 | PLN02191 | 1.0e-69 | 44 | 551 | 535 | + L-ascorbate oxidase |
PLN02604 | PLN02604 | 4.0e-79 | 50 | 551 | 538 | + oxidoreductase |
TIGR03388 | ascorbase | 2.0e-87 | 44 | 551 | 550 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
TIGR03389 | laccase | 0 | 27 | 573 | 551 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 27 | 573 | 7 | 550 | unknown [Populus trichocarpa] |
RefSeq | NP_181568.1 | 0 | 1 | 573 | 1 | 580 | LAC5 (laccase 5); laccase [Arabidopsis thaliana] |
RefSeq | XP_002312186.1 | 0 | 27 | 573 | 31 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 1 | 573 | 1 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520796.1 | 0 | 27 | 573 | 33 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 26 | 551 | 1 | 521 | A Chain A, Crystal Structure Of Xrn1-Substrate Complex |
PDB | 1asq_A | 0 | 26 | 551 | 1 | 521 | A Chain A, Crystal Structure Of Xrn1-Substrate Complex |
PDB | 1asp_B | 0 | 26 | 551 | 1 | 521 | A Chain A, Crystal Structure Of Xrn1-Substrate Complex |
PDB | 1asp_A | 0 | 26 | 551 | 1 | 521 | A Chain A, Crystal Structure Of Xrn1-Substrate Complex |
PDB | 1aso_B | 0 | 26 | 551 | 1 | 521 | A Chain A, Crystal Structure Of Xrn1-Substrate Complex |