Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10016788m |
Family | GH17 |
Protein Properties | Length: 386 Molecular Weight: 42901.1 Isoelectric Point: 6.8115 |
Chromosome | Chromosome/Scaffold: 10 Start: 2641537 End: 2643981 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 22 | 339 | 0 |
VGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNELLQNMSTDPTKAETWIQQRLQPHISKTRITSIVVGNEIFKTND RVLISSLLPAMKSVYSALLSLGLEKQVTVTSAHSLDILQTSYPPSSGSFKEEFVQFLQPLLDFHSQIKSPFLINAYPFFAYKDSPKEIPLEYALFQPNHG MIDPNTNLHYDNMLFAQVDALYSAVKTLGHTDIEIRISETGWPSKGDVDEIGASPENAALYNGNLLRLVEQRKGTPAKQSVPIDVYVFALFNENLKPGPT SERNYGLFYPDGKPVYNV |
Full Sequence |
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Protein Sequence Length: 386 Download |
MSILRFSPNR EEESVRVNSQ GVGINYGQIA NNLPSPARVA VLLRSLNITR VKLYDADPNV 60 LFSFSNSQVD FMIGLGNELL QNMSTDPTKA ETWIQQRLQP HISKTRITSI VVGNEIFKTN 120 DRVLISSLLP AMKSVYSALL SLGLEKQVTV TSAHSLDILQ TSYPPSSGSF KEEFVQFLQP 180 LLDFHSQIKS PFLINAYPFF AYKDSPKEIP LEYALFQPNH GMIDPNTNLH YDNMLFAQVD 240 ALYSAVKTLG HTDIEIRISE TGWPSKGDVD EIGASPENAA LYNGNLLRLV EQRKGTPAKQ 300 SVPIDVYVFA LFNENLKPGP TSERNYGLFY PDGKPVYNVG LQGYLPDIIY SSSAATIKIL 360 NLWRAVMGLS VAGFIIEMGV KTRMR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-5 | 90 | 332 | 246 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-99 | 22 | 339 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001031432.1 | 0 | 72 | 385 | 1 | 314 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_565652.1 | 0 | 14 | 385 | 21 | 392 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_973548.1 | 0 | 14 | 359 | 21 | 366 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 14 | 359 | 21 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 15 | 354 | 6 | 344 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 22 | 339 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 22 | 341 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG514593 | 283 | 89 | 371 | 0 |
FY453254 | 274 | 14 | 287 | 0 |
EX137256 | 289 | 14 | 302 | 0 |
EG527250 | 273 | 37 | 309 | 0 |
EG514593 | 29 | 66 | 94 | 0.0004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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