Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10017202m |
Family | CBM43 |
Protein Properties | Length: 229 Molecular Weight: 23989.9 Isoelectric Point: 5.6522 |
Chromosome | Chromosome/Scaffold: 10 Start: 5939528 End: 5941786 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 82 | 164 | 3.9e-33 |
WCVARENAAKMALQAALDYTCGIGGADCSEIQEGGKCYNPNSLRAHASFAFNSYYQKNPIPSSCNFGGTAVTISGDPSVGSCH |
Full Sequence |
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Protein Sequence Length: 229 Download |
MGKGFRLVTS LLLLSLLFSG TKANSEPIGE EKDITTPLAT NPTTTATTVV PNSNSDASAV 60 ATTPLTIPSS PPRVAAQPGE SWCVARENAA KMALQAALDY TCGIGGADCS EIQEGGKCYN 120 PNSLRAHASF AFNSYYQKNP IPSSCNFGGT AVTISGDPSV GSCHFPSTST SESILNITSE 180 DGLGLFGRPS HPTPKPEASS SSSSTFSFLY FYYRLICFCF YIPLLLSP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-20 | 81 | 152 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-36 | 81 | 165 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001031450.1 | 0 | 1 | 227 | 1 | 225 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_001118420.1 | 0 | 1 | 159 | 1 | 159 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 5.60519e-45 | 82 | 187 | 99 | 204 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 9.99995e-41 | 7 | 179 | 9 | 171 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
RefSeq | XP_002512573.1 | 2e-40 | 34 | 165 | 170 | 308 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000001 | 68 | 169 | 3 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |