Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10017897m |
Family | CBM43 |
Protein Properties | Length: 554 Molecular Weight: 60339.5 Isoelectric Point: 6.6269 |
Chromosome | Chromosome/Scaffold: 10 Start: 10335641 End: 10337490 |
Description | glycosyl hydrolase family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 358 | 439 | 5.9e-31 |
WCVAKQEATNAQLQANIDWVCSQGIDCKTISPGGTCFDNNNMKTRASFVMNVYYQSKGCSEDACNFSGSGMVTSNDPSTSSC | |||
GH17 | 30 | 338 | 0 |
VGINYGTLGNLPPPQQVVDFIKTKTIFDSVKIFDANPDILRALAGSGIHVTITVPNGNIPALANLENARQWVAANVLPFHQTTIKYICVGNEILLTKDMN LISNLVPAMQSLTEALKASGLTDTKVTTPHAFTVGYNQNAPSESRFNDDQKDFFAKVLEFHRQAKSPFMISAYPYFMVDPNNVNFAIFGPSSHGLMDTHT QHTYNNMFDAIMDATYSAMSALGYGDVDISVGETGWPSVCDAPWCTPENAANYNRNIIKRAQNIGTPLMPNRHIDIFIFALFNEDGKPGPNVEKHWGLFK PDFSPVYDA |
Full Sequence |
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Protein Sequence Length: 554 Download |
MAKTPPFFTP PSLLLVSAVI FQLSAVTSAV GINYGTLGNL PPPQQVVDFI KTKTIFDSVK 60 IFDANPDILR ALAGSGIHVT ITVPNGNIPA LANLENARQW VAANVLPFHQ TTIKYICVGN 120 EILLTKDMNL ISNLVPAMQS LTEALKASGL TDTKVTTPHA FTVGYNQNAP SESRFNDDQK 180 DFFAKVLEFH RQAKSPFMIS AYPYFMVDPN NVNFAIFGPS SHGLMDTHTQ HTYNNMFDAI 240 MDATYSAMSA LGYGDVDISV GETGWPSVCD APWCTPENAA NYNRNIIKRA QNIGTPLMPN 300 RHIDIFIFAL FNEDGKPGPN VEKHWGLFKP DFSPVYDAGV LRGGTGGTPP IISHKGKWCV 360 AKQEATNAQL QANIDWVCSQ GIDCKTISPG GTCFDNNNMK TRASFVMNVY YQSKGCSEDA 420 CNFSGSGMVT SNDPSTSSCV VVANGSHMGN SIEPPRKLPK WCVPKEGTSD AQLQANIDWL 480 CDHPQSFVLC KPIFPGPDGS CFRETLRTRA TFVMSYYFMS RGVSWEACNN FNGSGIITYT 540 NPSTVSCFIN AIP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-8 | 460 | 536 | 84 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-19 | 460 | 547 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam07983 | X8 | 2.0e-23 | 357 | 428 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 357 | 440 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-87 | 30 | 337 | 316 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK76666.1 | 0 | 33 | 439 | 32 | 447 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | AAK76666.1 | 0.000000000001 | 460 | 547 | 365 | 447 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
RefSeq | NP_181494.1 | 0 | 33 | 551 | 33 | 545 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_191103.1 | 0 | 33 | 439 | 32 | 447 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | NP_191103.1 | 0.000000000001 | 460 | 547 | 365 | 447 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 30 | 331 | 2 | 306 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
PDB | 3f55_C | 0 | 30 | 331 | 2 | 306 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
PDB | 3f55_B | 0 | 30 | 331 | 2 | 306 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
PDB | 3f55_A | 0 | 30 | 331 | 2 | 306 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
PDB | 3em5_D | 0 | 30 | 331 | 2 | 306 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |