| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10017898m |
| Family | GT47 |
| Protein Properties | Length: 477 Molecular Weight: 55935.3 Isoelectric Point: 8.3885 |
| Chromosome | Chromosome/Scaffold: 10 Start: 6949955 End: 6951385 |
| Description | galactosyltransferase 13 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 66 | 411 | 0 |
| CAGRYIYIHNLPSRFNDDLIKNCEAYAELRNKCKYLVNSGFGPKILEDDHNHTTRVLTTETGSWYSTNQFMLEVIFREKMRHYECLTNDSSRSSAVFVPF YAGFDVRRFWGYSVKLRDQLGEDLAQWLRERPEWSKMYGRDHFFVTGRVGRDFRRVSDQDSDWGNKLMRLPEFENMTMLSIETNCWSNEFAVPYPTYFHP ERRIEVKRWQRKVRKMERRYLFSFVGAPRPEMEESIRGEIIRQCLASQGKCKFLNCETLSKDCGDPVKVMEVFQDSVFCLQPPGDTPTRRSTFDSILAGC IPVFFNPDSVYSQYKWYFPKDHTKYSVYVPEEDVKNGKVIIEKLLV | |||
| Full Sequence |
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| Protein Sequence Length: 477 Download |
| MEEFNTKKKQ TVRKRSPKLL IDILPTLVFC LLFVLHINQI ITFLFLSDKQ TLHITVKAKH 60 GETDTCAGRY IYIHNLPSRF NDDLIKNCEA YAELRNKCKY LVNSGFGPKI LEDDHNHTTR 120 VLTTETGSWY STNQFMLEVI FREKMRHYEC LTNDSSRSSA VFVPFYAGFD VRRFWGYSVK 180 LRDQLGEDLA QWLRERPEWS KMYGRDHFFV TGRVGRDFRR VSDQDSDWGN KLMRLPEFEN 240 MTMLSIETNC WSNEFAVPYP TYFHPERRIE VKRWQRKVRK MERRYLFSFV GAPRPEMEES 300 IRGEIIRQCL ASQGKCKFLN CETLSKDCGD PVKVMEVFQD SVFCLQPPGD TPTRRSTFDS 360 ILAGCIPVFF NPDSVYSQYK WYFPKDHTKY SVYVPEEDVK NGKVIIEKLL VEISKERILS 420 MRNEVEKIIP MIIYTKPGAV GPDKIEDAFE IAVSKVLERV SLFQDNATDR SSYYII* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 7.0e-66 | 66 | 413 | 363 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_180833.1 | 0 | 1 | 464 | 1 | 464 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | NP_180834.1 | 0 | 14 | 474 | 3 | 492 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002321098.1 | 0 | 16 | 466 | 7 | 444 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518606.1 | 0 | 63 | 460 | 73 | 460 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
| RefSeq | XP_002518609.1 | 0 | 63 | 460 | 73 | 463 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
