Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10018365m |
Family | AA1 |
Protein Properties | Length: 547 Molecular Weight: 61675.1 Isoelectric Point: 6.0155 |
Chromosome | Chromosome/Scaffold: 9 Start: 2104400 End: 2107312 |
Description | SKU5 similar 18 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 42 | 500 | 0 |
GANKQIIVINDMFPGPILSATAGDIVNVNIFNHLTEPFLMTWNGLQMRKNSWQDGVRGTNCPILPGTNWTYRFQIKDQIGSYFYFPTLLLQKAAGGYGSI RVYSPELVQVPFPHPDGEFDILIGDWFYTDHRVMRASLDNGLSLATPDGILINGRGPEETFFAFQPGKTYRLRISNVGLKTSLNFRIQDHDMLLVETEGS YVQKHTYSSLDIHVGQSYSVLVTAKTDPVGIYRSYYIFASARFTNFYLSGIALIRYPNSPLDPVGPVPAAPEPWDYASSVQQALSIREDLDVGAARPNPQ GSYHYGRVNVTRTLIFQNDVMTSSNKLRYTVNGVSFVFPETPLKLVDHFQLKNTIVPDMFPTYPSNKTPSFGTSVVDIRYKDFVHIVFENPLDELQSWHI DGYNFFVVGMGFGGWSESKRAGYNLVDAVSRSTIQVYPYSWVAILIAMDNQGMWNVRSQ |
Full Sequence |
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Protein Sequence Length: 547 Download |
MRNVVVEVLL LISMVLLELS NAFAPSVSYE WVVSYSQRSV LGANKQIIVI NDMFPGPILS 60 ATAGDIVNVN IFNHLTEPFL MTWNGLQMRK NSWQDGVRGT NCPILPGTNW TYRFQIKDQI 120 GSYFYFPTLL LQKAAGGYGS IRVYSPELVQ VPFPHPDGEF DILIGDWFYT DHRVMRASLD 180 NGLSLATPDG ILINGRGPEE TFFAFQPGKT YRLRISNVGL KTSLNFRIQD HDMLLVETEG 240 SYVQKHTYSS LDIHVGQSYS VLVTAKTDPV GIYRSYYIFA SARFTNFYLS GIALIRYPNS 300 PLDPVGPVPA APEPWDYASS VQQALSIRED LDVGAARPNP QGSYHYGRVN VTRTLIFQND 360 VMTSSNKLRY TVNGVSFVFP ETPLKLVDHF QLKNTIVPDM FPTYPSNKTP SFGTSVVDIR 420 YKDFVHIVFE NPLDELQSWH IDGYNFFVVG MGFGGWSESK RAGYNLVDAV SRSTIQVYPY 480 SWVAILIAMD NQGMWNVRSQ KAEQWYLGQE LYLRVKGDGQ EDPSNIPVQD ECPIPENFIR 540 CGRILQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 5.0e-176 | 29 | 543 | 519 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 22 | 545 | 524 | + copper ion binding / pectinesterase | ||
PLN02354 | PLN02354 | 0 | 25 | 544 | 530 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 21 | 543 | 523 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 25 | 543 | 521 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF26773.2 | 0 | 1 | 544 | 1 | 510 | AC007396_22 T4O12.2 [Arabidopsis thaliana] |
GenBank | AAF87105.1 | 0 | 1 | 544 | 1 | 497 | AC006434_1 F10A5.2 [Arabidopsis thaliana] |
GenBank | AAM67203.1 | 0 | 1 | 544 | 1 | 544 | pectinesterase, putative [Arabidopsis thaliana] |
GenBank | ABK28469.1 | 0 | 1 | 544 | 1 | 543 | unknown [Arabidopsis thaliana] |
RefSeq | NP_177707.1 | 0 | 1 | 544 | 1 | 544 | sks18 (SKU5 Similar 18); copper ion binding / pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 529 | 6 | 534 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1asq_A | 0 | 29 | 529 | 6 | 534 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1asp_B | 0 | 29 | 529 | 6 | 534 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1asp_A | 0 | 29 | 529 | 6 | 534 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1aso_B | 0 | 29 | 529 | 6 | 534 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |