Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10018427m |
Family | CBM43 |
Protein Properties | Length: 507 Molecular Weight: 54468.6 Isoelectric Point: 5.5171 |
Chromosome | Chromosome/Scaffold: 9 Start: 8408218 End: 8410956 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 373 | 454 | 6.2e-32 |
CTAREGADPKMLQAALDWACGPGKIDCSPIKQGEACYEPDSVIAHANYAFDTYYHQTGNNPDACDFNGVASITTTDPSHGSC | |||
GH17 | 35 | 354 | 0 |
IGVNIGTDLSDMPHPTQVVALLKAQQIRHVRLYDADPGMLIALANTKIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATTITAISVGSEVLTSLP NAAPILVNAIKNVHSALLSSNLDRLIKVSTPLSTSLILDPFPPSQAFFNRSLNPVIVPLLSFLQSTNSYLMINVYPYYDYMQSNGVIPLDYALFKPIPPN KEAVDANTLVHYSNAFDAMVDATYFAMAYLNFTNIPVLVTESGWPSKGESNEPDATLDNANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDTKAG SLSEKSWGLFNANGDPVYIL |
Full Sequence |
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Protein Sequence Length: 507 Download |
MAPHLHLLLP HFLVSLLVLT SASSSAPPAD EGAFIGVNIG TDLSDMPHPT QVVALLKAQQ 60 IRHVRLYDAD PGMLIALANT KIKVIISIPN DQLLGIGQSN STAANWVKRN VIAHYPATTI 120 TAISVGSEVL TSLPNAAPIL VNAIKNVHSA LLSSNLDRLI KVSTPLSTSL ILDPFPPSQA 180 FFNRSLNPVI VPLLSFLQST NSYLMINVYP YYDYMQSNGV IPLDYALFKP IPPNKEAVDA 240 NTLVHYSNAF DAMVDATYFA MAYLNFTNIP VLVTESGWPS KGESNEPDAT LDNANTYNSN 300 LIRHVLNKTG TPKRPGIAVS TYIYELYNED TKAGSLSEKS WGLFNANGDP VYILRLTDSG 360 GVLANDTTNQ TYCTAREGAD PKMLQAALDW ACGPGKIDCS PIKQGEACYE PDSVIAHANY 420 AFDTYYHQTG NNPDACDFNG VASITTTDPS HGSCVFAGSR GDGKNGTTVN ITAPSANSTS 480 SGIRSDLYYS RGIWSILTVI LNVAFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-9 | 64 | 347 | 293 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 9.0e-20 | 371 | 443 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-39 | 371 | 456 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-90 | 35 | 352 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG51762.1 | 0 | 46 | 450 | 1 | 404 | AC066691_2 beta-1,3-glucanase precursor, putative; 34016-35272 [Arabidopsis thaliana] |
GenBank | ABI93926.1 | 0 | 18 | 504 | 16 | 502 | At1g66250 [Arabidopsis thaliana] |
RefSeq | NP_176799.2 | 0 | 18 | 504 | 16 | 502 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002265396.1 | 0 | 29 | 481 | 16 | 467 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002531922.1 | 0 | 31 | 481 | 30 | 479 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 35 | 352 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 35 | 356 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 35 | 356 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 35 | 356 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 35 | 356 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |