| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10018590m |
| Family | GT47 |
| Protein Properties | Length: 433 Molecular Weight: 50040.3 Isoelectric Point: 7.9564 |
| Chromosome | Chromosome/Scaffold: 9 Start: 6760841 End: 6762837 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 51 | 368 | 0 |
| PLRVFMYDLPRKFNVAMMDPQSSDVEPLTGKNLPSWPQTSGIKRQHSVEYWLMASLLHGGGGGEEEKEAFRVFDPELADAFYVPFFSSLSFNTHGKNMTD PDTEFDRQLQVELMEYLENSKYWQRSGGRDHVIPMTHPNAFRFLRQQVNASILVVVDFGRYPREMARLGKDVVSPYVHVVESFTEDGGVDTPDPFEARTT LLYFRGNTVRKAEGKIRLRLEKLLAGNSDVHYEKSVATTQNIKVSTEGMRSSKFCLHPAGDTPSSCRLFDAIVSHCIPVIISDRIELPFEDEIDYSEFSV FFSIKEALEPGYILNNLR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 433 Download |
| MYVKTICIIV FFVFLIASYS IYMGTVDPRP YFSQLQSQPR RASPCSITGR PLRVFMYDLP 60 RKFNVAMMDP QSSDVEPLTG KNLPSWPQTS GIKRQHSVEY WLMASLLHGG GGGEEEKEAF 120 RVFDPELADA FYVPFFSSLS FNTHGKNMTD PDTEFDRQLQ VELMEYLENS KYWQRSGGRD 180 HVIPMTHPNA FRFLRQQVNA SILVVVDFGR YPREMARLGK DVVSPYVHVV ESFTEDGGVD 240 TPDPFEARTT LLYFRGNTVR KAEGKIRLRL EKLLAGNSDV HYEKSVATTQ NIKVSTEGMR 300 SSKFCLHPAG DTPSSCRLFD AIVSHCIPVI ISDRIELPFE DEIDYSEFSV FFSIKEALEP 360 GYILNNLRQF PKEKWLQMWE NLKNVSHHFE FQYPPKREDA VNMLWRQVKH KIPSVKLAVH 420 RNRRLKVPDW WL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK08881 | rpsN | 0.009 | 34 | 63 | 36 | + 30S ribosomal protein S14; Reviewed | ||
| pfam03016 | Exostosin | 6.0e-80 | 50 | 370 | 328 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC18793.1 | 0 | 1 | 412 | 1 | 440 | End is cut off [Arabidopsis thaliana] |
| RefSeq | NP_176908.2 | 0 | 1 | 432 | 1 | 430 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002272591.1 | 0 | 35 | 431 | 36 | 426 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002456855.1 | 0 | 52 | 431 | 61 | 431 | hypothetical protein SORBIDRAFT_03g044100 [Sorghum bicolor] |
| RefSeq | XP_002512333.1 | 0 | 25 | 431 | 25 | 431 | catalytic, putative [Ricinus communis] |
