Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10019456m |
Family | CBM43 |
Protein Properties | Length: 122 Molecular Weight: 13550.3 Isoelectric Point: 5.0358 |
Chromosome | Chromosome/Scaffold: 9 Start: 9485273 End: 9485638 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 35 | 117 | 2e-33 |
WCVISLSATDEQMQANIDWGCSQGKVDCRPIRPGGACFEPNNLRNHASFVMNEYYQSHHRTEEACDFNGTGIYIITDPSYGDC |
Full Sequence |
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Protein Sequence Length: 122 Download |
MCPSKTLVFL ILSIVVIDHL PVSSSTIRNL KETQWCVISL SATDEQMQAN IDWGCSQGKV 60 DCRPIRPGGA CFEPNNLRNH ASFVMNEYYQ SHHRTEEACD FNGTGIYIIT DPSYGDCVYV 120 S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-22 | 34 | 106 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 34 | 119 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK28052.1 | 2.00386e-43 | 7 | 121 | 10 | 116 | unknown [Arabidopsis thaliana] |
RefSeq | NP_001078361.1 | 2.00386e-43 | 7 | 121 | 10 | 116 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_001118954.1 | 1.99993e-41 | 7 | 121 | 10 | 114 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_001118955.1 | 2.00386e-43 | 7 | 121 | 10 | 116 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_192648.2 | 6.99949e-42 | 6 | 121 | 9 | 116 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 6e-26 | 35 | 121 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |