Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10019644m |
Family | GH17 |
Protein Properties | Length: 340 Molecular Weight: 37357.6 Isoelectric Point: 5.7108 |
Chromosome | Chromosome/Scaffold: 9 Start: 1257336 End: 1258355 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 25 | 333 | 0 |
GVCDGRNGDNLPSPTQTISLYQKINIGWIRLYEPFPDLLNSLQGTGLLVAVGPKNEEIKTLADQYEYAVNWVKTFIAPYNVSFNWITVGNEVIQSEIGRY VPQAMRHIKAALTQTGISRTIHVTTVLSTAALANSYPPSAGVFKPQITEVLTEIASVLSSTDSPLMVNIYPYFAYASDPSHVSLAYATFGSDKPVVIDGN YQYTNIFDAAVDSFNAALEKLGHGGVKVYVAETGWPTRGNPPYTSVENARAYNQGLLKKLTTGARATPRRPQVPVVTFFFEMFNEDLKQGEVEQSFGFFT PNMVPVYDM |
Full Sequence |
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Protein Sequence Length: 340 Download |
MFLVITLLFL STRSTGVVGD TLFAGVCDGR NGDNLPSPTQ TISLYQKINI GWIRLYEPFP 60 DLLNSLQGTG LLVAVGPKNE EIKTLADQYE YAVNWVKTFI APYNVSFNWI TVGNEVIQSE 120 IGRYVPQAMR HIKAALTQTG ISRTIHVTTV LSTAALANSY PPSAGVFKPQ ITEVLTEIAS 180 VLSSTDSPLM VNIYPYFAYA SDPSHVSLAY ATFGSDKPVV IDGNYQYTNI FDAAVDSFNA 240 ALEKLGHGGV KVYVAETGWP TRGNPPYTSV ENARAYNQGL LKKLTTGARA TPRRPQVPVV 300 TFFFEMFNED LKQGEVEQSF GFFTPNMVPV YDMWNVKCL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-5 | 85 | 326 | 265 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-94 | 25 | 332 | 311 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05913.1 | 0 | 25 | 331 | 28 | 333 | Glycoside hydrolase, family 17 [Medicago truncatula] |
RefSeq | NP_177901.1 | 0 | 1 | 336 | 1 | 335 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_177902.1 | 0 | 3 | 334 | 10 | 342 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002302261.1 | 0 | 25 | 337 | 8 | 320 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 25 | 334 | 1 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 25 | 333 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 25 | 333 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 25 | 333 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 25 | 333 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 25 | 333 | 3 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |