Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10019651m |
Family | CBM43 |
Protein Properties | Length: 381 Molecular Weight: 39965.8 Isoelectric Point: 5.5545 |
Chromosome | Chromosome/Scaffold: 9 Start: 582541 End: 583886 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 294 | 375 | 1e-31 |
WCVAKPTVPDPIIQEAMNFACGSGADCHSIQPSGPCFKPNTLWAHASFAFNSYWQRTKSAGGSCTFGGTGILVTVDPSYNGC |
Full Sequence |
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Protein Sequence Length: 381 Download |
MESKRALTTI CILLCLFLSA SFFTQSVDAR KHVGFVRDSK HKPKKLNINA VKHTSLLEKM 60 MTQLNLAQPL DYSTTSSNTQ LPYGVSSPLT LPPYVSLPPL SVPEDAPPFC VNPPNTPLNS 120 PPSSSSYPGL SPPPSPISLP NPPESSSNPN SNPNPPDSTS NPNPPESSSN PIPPVTVPNP 180 PESSSNPNPP ESSSNPNPPI TVPYPPESSN SNPPKTIPSP PEPGYTPSPS GPISGPPYNE 240 PGPSTPTDTP SPYGDIPSPT GSIPSPSSGF LPPIVYPPPM VPPPPSVTPT SAYWCVAKPT 300 VPDPIIQEAM NFACGSGADC HSIQPSGPCF KPNTLWAHAS FAFNSYWQRT KSAGGSCTFG 360 GTGILVTVDP SYNGCHFDFF * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-21 | 294 | 364 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-37 | 294 | 377 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD30228.1 | 0 | 48 | 371 | 2 | 344 | AC007202_10 T8K14.10 [Arabidopsis thaliana] |
RefSeq | NP_001117621.1 | 0 | 1 | 380 | 1 | 396 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_178066.2 | 0 | 1 | 380 | 1 | 397 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002264966.1 | 0 | 1 | 380 | 1 | 368 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 0 | 85 | 371 | 10 | 292 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-18 | 294 | 377 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |