| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10020001m |
| Family | GH116 |
| Protein Properties | Length: 951 Molecular Weight: 106241 Isoelectric Point: 7.1177 |
| Chromosome | Chromosome/Scaffold: 13 Start: 148064 End: 155660 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 535 | 897 | 0 |
| GRFLYLEGVEYVMWNTYDVHFYASYALLMLFPKIELNIQRDFAKAVLSEDGRKVKFLAEGNWGIRKVRGAVPHDLGMHDPWNEMNAYNIHDTSKWKDLNP KFVLQVYRDFAATGDYQFGIDVWPAVRAAMEYMEQFDRDNDDLIENDGFPDQTYDTWTVHGVSAYCGCLWLAALQAAAAMALQIGDKFFAELCKNKFLNA KAALETKLWNGSYLNYDSGASSNSKSIQTDQLAGQWYTASSGLPPIFEESKIRSSLQKIFDFNVMKTKGGRMGAVNGMHPDGKVDETCMQSREIWTGVTY AAAATMILSGMEEQGFTTAEGIFTAGWSEEGFGYWFQTPEGWTMDGHYRSLIYMRPLAIWGMQ | |||
| Full Sequence |
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| Protein Sequence Length: 951 Download |
| MVGATLFHRR KHSWPAEEFI SRNTLQLLDF DSAAPPPHAW RRRLNCHANI LKEFTITFRE 60 AIKMVRLGIR LWSYVREEAS HGRKAPIDPF TKENCKPSAS QGVPLGGMGS GSISRGFRGE 120 FKQWQITPGT CDPSPMMSNQ FSIFISRDGG HKKYASVLAP GQHGSLGKSR DKGISSWGWN 180 LNGQHSTYHA LFPRAWTIYD GEPDPELKIS CRQISPFIPN NYRDSSLPAS VFVYTLVNTG 240 KERAKVSLLF TWANSIGGTS HMSGGHVNEP FIGEDGVSGV LLHHKTGKGN PPVTFAISAC 300 ETQNVNVTVL PCFGLSEDSS MTAKDMWDMM EKDGKFDQAN FNSGPSMPSS AGDTICAAVS 360 ASAWVEAHGR CTVSFALSWS SPKVKFSKGS TYDRRYTKYY GTSPRAALDL VHDALTHYKR 420 WEGDIEAWQN PILGDDRLPE WYKFTLFNEL YFLVAGGTVW IDSASLHANG DSQLQQSNSR 480 NPDGKASGVD SKDQQNNLND CDSNGIKSNG EASVIHQKNG LFVDTRHVDD DDDVGRFLYL 540 EGVEYVMWNT YDVHFYASYA LLMLFPKIEL NIQRDFAKAV LSEDGRKVKF LAEGNWGIRK 600 VRGAVPHDLG MHDPWNEMNA YNIHDTSKWK DLNPKFVLQV YRDFAATGDY QFGIDVWPAV 660 RAAMEYMEQF DRDNDDLIEN DGFPDQTYDT WTVHGVSAYC GCLWLAALQA AAAMALQIGD 720 KFFAELCKNK FLNAKAALET KLWNGSYLNY DSGASSNSKS IQTDQLAGQW YTASSGLPPI 780 FEESKIRSSL QKIFDFNVMK TKGGRMGAVN GMHPDGKVDE TCMQSREIWT GVTYAAAATM 840 ILSGMEEQGF TTAEGIFTAG WSEEGFGYWF QTPEGWTMDG HYRSLIYMRP LAIWGMQWAL 900 SLPKAILDAP KINMMDRVHM SPRSRRFSHN VKVVKHKAKC FGNSKLNCTC * 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 4.0e-28 | 102 | 462 | 366 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 5.0e-63 | 102 | 421 | 332 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 1.0e-66 | 535 | 900 | 384 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-151 | 535 | 898 | 368 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB01359.1 | 0 | 1 | 950 | 1 | 937 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_189060.2 | 0 | 1 | 950 | 1 | 950 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002285674.1 | 0 | 1 | 950 | 1 | 978 | PREDICTED: similar to catalytic [Vitis vinifera] |
| RefSeq | XP_002303825.1 | 0 | 1 | 950 | 1 | 966 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518119.1 | 0 | 1 | 950 | 1 | 968 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO779860 | 279 | 677 | 951 | 0 |
| HO779860 | 144 | 535 | 678 | 0 |
| EX126394 | 285 | 605 | 889 | 0 |
| GT045992 | 335 | 601 | 935 | 0 |
| HO779860 | 54 | 416 | 469 | 2e-16 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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