| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10020243m |
| Family | GT8 |
| Protein Properties | Length: 659 Molecular Weight: 76309.1 Isoelectric Point: 8.1711 |
| Chromosome | Chromosome/Scaffold: 13 Start: 2854787 End: 2857787 |
| Description | plant glycogenin-like starch initiation protein 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 324 | 533 | 3.39997e-41 |
| ATILHSAHVYVCGAIAAAQSIRQSGSTRDLVILVDDNISGYHRSGLEAAGWQIRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRN IDFLFSMPEISATGNNGTLFNSGVMVIEPCNCTFQLLMEHINEIESYNGGDQGYLNEVFTWWHRIPKHMNFLKHFWVGDEDDVRRKKTELFGAEPPILYV LHYLGMKPWL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 659 Download |
| MANSPAAAAA TAATGDSRRR LSASIEAICK RRFRRNSKGG GRSDMVKPFN FINFPTQDKN 60 NSCCCCSKFQ IVKILLFIFL SATLFTIIYS PEAYRHSLSH SSSRWIWRRQ DSRYVSDLDI 120 NWDDVTKTLE SVEEGRTIGV LNFDSKEIRR WREVAKTKDN EDEENVVVLD LDYAEKNVTW 180 DALYPEWIDE EQETEVPVCP NLPKIKVPTR RLDLIVVKLP CRKEGNWSRD VGRLHLQMAA 240 ATVAASAKGF FRGHVLFVSR CFPIPNMFRC KDLVSRRGDV WLYKPNLDTL RDKLQLPLGS 300 CELSLPLGIK ERPSLGNPRR EAYATILHSA HVYVCGAIAA AQSIRQSGST RDLVILVDDN 360 ISGYHRSGLE AAGWQIRTIQ RIRNPKAEKD AYNEWNYSKF RLWQLTDYDK IIFIDADLLI 420 LRNIDFLFSM PEISATGNNG TLFNSGVMVI EPCNCTFQLL MEHINEIESY NGGDQGYLNE 480 VFTWWHRIPK HMNFLKHFWV GDEDDVRRKK TELFGAEPPI LYVLHYLGMK PWLCYRDYDC 540 NFNSDIFVEF ATDIAHRRWW MVHDAMPQEL HQFCYLRSKQ KAQLEYDRRQ AEAANYEDGH 600 WKIRVKDPRL KICIDKLCNW KSMLRHWGES NWTDYESFVP TPPAITAVRR SSIPGNNL* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00505 | Glyco_transf_8 | 3.0e-12 | 326 | 532 | 245 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
| cd06914 | GT8_GNT1 | 2.0e-15 | 333 | 483 | 164 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
| PLN00176 | PLN00176 | 1.0e-15 | 302 | 431 | 133 | + galactinol synthase | ||
| pfam01501 | Glyco_transf_8 | 3.0e-43 | 324 | 535 | 256 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| cd02537 | GT8_Glycogenin | 7.0e-72 | 321 | 566 | 256 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001030722.1 | 0 | 1 | 658 | 1 | 659 | PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_566615.1 | 0 | 1 | 658 | 1 | 655 | PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002275240.1 | 0 | 9 | 652 | 2 | 636 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310513.1 | 0 | 1 | 655 | 1 | 629 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517237.1 | 0 | 17 | 655 | 14 | 629 | glycogenin, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u2w_B | 1e-21 | 321 | 532 | 5 | 221 | A Chain A, Structure Of The Starch Branching Enzyme I (bei) Complexed With Maltopentaose From Oryza Sativa L |
| PDB | 3u2w_A | 1e-21 | 321 | 532 | 5 | 221 | A Chain A, Structure Of The Starch Branching Enzyme I (bei) Complexed With Maltopentaose From Oryza Sativa L |
| PDB | 3qvb_A | 1e-21 | 321 | 532 | 5 | 221 | A Chain A, Structure Of The Starch Branching Enzyme I (bei) Complexed With Maltopentaose From Oryza Sativa L |
| PDB | 3q4s_A | 1e-21 | 321 | 532 | 5 | 221 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
| PDB | 3u2x_B | 1e-21 | 321 | 532 | 5 | 221 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
