| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10020324m |
| Family | CE8 |
| Protein Properties | Length: 608 Molecular Weight: 66953.2 Isoelectric Point: 8.4849 |
| Chromosome | Chromosome/Scaffold: 13 Start: 5993601 End: 5997527 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 291 | 586 | 0 |
| VIVGPYKTDNFTTITDAIAAAPNNTRPEDGYFVIYAREGVYEEYVVVPFNKKNLLLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGERFMAVDITFRN TAGPEKHQAVALRNNAEGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRTEPNQNTGISFINCT IKAAPDLEADPNSTMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTTGLDTIYYGEYNNFGPGAKTDQRVQWFGYNLLDMAQAMNFTVYNFT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 608 Download |
| MQTLHFSSSL LCLSVIFLSC AFLISPQHPP LQPPSLPPSQ PPSESPSLPP SLPPSQPPSL 60 PPASQSTSVA CKSTPYPKLC RTILSAVKSS PSDPYRYGKF TIKQCLKQAS RLSKVINGYV 120 RRLRNKPGSA TAEEIGAVED CGELAELSVS YLETVTVELK HAAMMTSALV EHVNSLLSGV 180 VTNQQTCLDG LVEAKSGFAA AFGSPMGNLT RLYSVSLGLV SHALNRNLKR FKASKGKILG 240 GRNSTYREPL ETLIKVLRKT CDKDKDCRKA NRHLGELGET SGGSILVNQA VIVGPYKTDN 300 FTTITDAIAA APNNTRPEDG YFVIYAREGV YEEYVVVPFN KKNLLLMGDG INKTIITGNH 360 NVVDGWTTYN CSSFAVVGER FMAVDITFRN TAGPEKHQAV ALRNNAEGST FYRCSFEGYQ 420 DTLYVHSLRQ FYRECDIYGT IDFIFGNAAA IFQNCNIYAR KPMAKQKNAI TAHGRTEPNQ 480 NTGISFINCT IKAAPDLEAD PNSTMTFLGR PWKPYSRTVF MQSYISDIVQ PVGWLEWNGT 540 TGLDTIYYGE YNNFGPGAKT DQRVQWFGYN LLDMAQAMNF TVYNFTMGDT WLPQTDIPFY 600 GGLVRKE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 7.0e-144 | 102 | 604 | 507 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02416 | PLN02416 | 4.0e-144 | 71 | 603 | 540 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN03043 | PLN03043 | 0 | 68 | 604 | 537 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02713 | PLN02713 | 0 | 68 | 604 | 540 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 291 | 589 | 300 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF19577.1 | 0 | 1 | 607 | 1 | 617 | AC011708_20 putative pectinesterase [Arabidopsis thaliana] |
| DDBJ | BAH20370.1 | 0 | 158 | 607 | 1 | 450 | AT3G10720 [Arabidopsis thaliana] |
| RefSeq | NP_187683.2 | 0 | 1 | 607 | 3 | 619 | pectinesterase, putative [Arabidopsis thaliana] |
| RefSeq | NP_196116.1 | 0 | 60 | 607 | 82 | 624 | pectinesterase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002515774.1 | 0 | 69 | 604 | 34 | 568 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 291 | 603 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 292 | 603 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 6e-24 | 301 | 593 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 6e-24 | 301 | 593 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 7e-24 | 301 | 593 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
