| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10020407m |
| Family | CE8 |
| Protein Properties | Length: 563 Molecular Weight: 62242.1 Isoelectric Point: 9.7939 |
| Chromosome | Chromosome/Scaffold: 13 Start: 6009545 End: 6011792 |
| Description | root hair specific 12 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 256 | 547 | 0 |
| DIVVAKDGSGKYRTISRALEDVPEKSEKRTIIYVKKGVYFENVKVEKKMWNVVVVGDGGSKSIVSGRLNNVDGTPTFQSATFAVFGKGFMARDMGFINTA GPSKHQAVALMASADLVAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQNCKILPRRPMKGQKNTITAQGRTDPNQNTGISIHRCNIS PLGDLTDVQTFLGRPWKNFSTTVIMETFLHGFVDRKGWLPWTGDSAPETIFYGEYKNTGAGASTRNRVKWKGLRFLSTKEANRFTVKPFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 563 Download |
| MSSSYGKVDE REHVMLEARR KSRKRIAIIA VSLVVLAGIV IGAVFGTMAH KKSTKVETNV 60 NGDSISVSVK AVCDVTLHKD KCFETVGSAP NASSLNPEQL FRYAVKITIA EVTKALNAFS 120 SSSRRDNTTT MNACVELLDL TIDSLNDTLT SSSNGDVTMP ELIDDLRTWL SSAETYQETC 180 VETLGETNDP ELKTFGESQL KNATEMTSNA LAIITWLGKI ADSFKLRRRL LSADVAVDFH 240 VGRRLLQSTD LRKVADIVVA KDGSGKYRTI SRALEDVPEK SEKRTIIYVK KGVYFENVKV 300 EKKMWNVVVV GDGGSKSIVS GRLNNVDGTP TFQSATFAVF GKGFMARDMG FINTAGPSKH 360 QAVALMASAD LVAFYRCTMN AYQDTLYVHA QRQFYRECTI IGTVDFIFGN SASVLQNCKI 420 LPRRPMKGQK NTITAQGRTD PNQNTGISIH RCNISPLGDL TDVQTFLGRP WKNFSTTVIM 480 ETFLHGFVDR KGWLPWTGDS APETIFYGEY KNTGAGASTR NRVKWKGLRF LSTKEANRFT 540 VKPFIDGERW LPARNMPFRS GL* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02484 | PLN02484 | 4.0e-155 | 32 | 562 | 552 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02745 | PLN02745 | 1.0e-159 | 5 | 562 | 596 | + Putative pectinesterase/pectinesterase inhibitor |
| PLN02468 | PLN02468 | 0 | 2 | 562 | 571 | + putative pectinesterase/pectinesterase inhibitor |
| PLN02314 | PLN02314 | 0 | 4 | 562 | 587 | + pectinesterase |
| pfam01095 | Pectinesterase | 0 | 256 | 548 | 298 | + Pectinesterase. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO42295.1 | 0 | 3 | 560 | 2 | 562 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_187682.1 | 0 | 1 | 562 | 1 | 561 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_196115.1 | 0 | 3 | 560 | 2 | 562 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002316458.1 | 0 | 1 | 562 | 1 | 569 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515781.1 | 0 | 1 | 562 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 256 | 562 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 254 | 562 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 4e-16 | 258 | 552 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 4e-16 | 258 | 552 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 4e-16 | 258 | 552 | 7 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
