Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10020572m |
Family | CBM43 |
Protein Properties | Length: 501 Molecular Weight: 53848.6 Isoelectric Point: 6.396 |
Chromosome | Chromosome/Scaffold: 13 Start: 4961801 End: 4964773 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 357 | 438 | 1.4e-30 |
CVAKADAEEDELEGGLNWACGQGGANCALIQPGQACFFPNDIKSHASFAYNDYYQKKKSTGGTCDFSGTAITTTRDPSYKTC | |||
GH17 | 23 | 342 | 0 |
IGVNIGTGLTNMPSPSDIVTLLKSRQITHVRLYDANSHMLKAFANTSIEVMVGVTNEEILKIGRYPSAAASWVNKNVAAYVPSTNITAIAVGSEVLTITP HVAPILASALNNIHKALVASNLNFKVKVSSPMSMDIMPKPFPPSTSTFSPSWNTTVYQLLQFLKNTGSFFMLNAYPYYGYTTANKIFPLEYALFKQLSPV KQIVDPNTLLHYNSMFDAMVDAAYYSMEALNFSKIPVVVTETGWPSSGGAGEADANLANAETFNSNLIKRVLNNSGPPSRPDIPINTYIYELYNEDKLSG PVSERNWGILFPNGTSVYPL |
Full Sequence |
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Protein Sequence Length: 501 Download |
MLLPRWSILL LISILATTNA AFIGVNIGTG LTNMPSPSDI VTLLKSRQIT HVRLYDANSH 60 MLKAFANTSI EVMVGVTNEE ILKIGRYPSA AASWVNKNVA AYVPSTNITA IAVGSEVLTI 120 TPHVAPILAS ALNNIHKALV ASNLNFKVKV SSPMSMDIMP KPFPPSTSTF SPSWNTTVYQ 180 LLQFLKNTGS FFMLNAYPYY GYTTANKIFP LEYALFKQLS PVKQIVDPNT LLHYNSMFDA 240 MVDAAYYSME ALNFSKIPVV VTETGWPSSG GAGEADANLA NAETFNSNLI KRVLNNSGPP 300 SRPDIPINTY IYELYNEDKL SGPVSERNWG ILFPNGTSVY PLGLTDGSES AGSTLFCVAK 360 ADAEEDELEG GLNWACGQGG ANCALIQPGQ ACFFPNDIKS HASFAYNDYY QKKKSTGGTC 420 DFSGTAITTT RDPSYKTCAY TGSPNANATG GNFPTTALGP VSPLVGNANA LIISIYHLPF 480 LAPLALTLLL LLLLQPDRLL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 35 | 332 | 313 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-20 | 355 | 427 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-36 | 355 | 440 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-76 | 23 | 342 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB01763.1 | 0 | 34 | 479 | 1 | 449 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
DDBJ | BAH57260.1 | 0 | 1 | 434 | 1 | 440 | AT3G13560 [Arabidopsis thaliana] |
EMBL | CAN72077.1 | 0 | 24 | 443 | 27 | 448 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_187965.1 | 0 | 1 | 479 | 1 | 485 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283548.1 | 0 | 24 | 440 | 27 | 445 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 23 | 342 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 23 | 340 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 23 | 340 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 23 | 345 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 23 | 345 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |