Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10020592m |
Family | CBM43 |
Protein Properties | Length: 494 Molecular Weight: 54162.2 Isoelectric Point: 5.0482 |
Chromosome | Chromosome/Scaffold: 13 Start: 8392073 End: 8394788 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 374 | 456 | 9.7e-26 |
WCMFNPNGRGNISKLGDNIDYACSLSDCTALGYGSSCGNLDANGNASYAFNMYFQVQNQEAQACDFEGLATITTRNISQGQCN | |||
GH17 | 33 | 352 | 0 |
LGVNWGTMASHQLPPKTVVQMLKDNNIKKVKLFDADTNTMGALAGSGIEVMVAIPNDLLKAMGSYQRAKDWVQRNVTRFNFNNGVKIKYVAVGNEPFLTA YNGSYINLTYPALVNIQTALNDAGIGDFIKATVPLNADVYNSPPDNQVPSAGRFRSDIIQEMTLIVNFLAQNKAPFTVNIYPFLSLYLSSDFPFDYAFFD GQNTINDNGVIYTNVLDANFDTLLASLNALNHGDMEVIVGEVGWPTDGDKNANVPNAERFYSGLLPRLANNVGTPMRKSYIEVYLFGFIDEDAKSVAPGN FERHWGLFKFDGQPKFPVDF |
Full Sequence |
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Protein Sequence Length: 494 Download |
MNHRQKQSPI TNSAVVFIII SAVCIFSGGV SALGVNWGTM ASHQLPPKTV VQMLKDNNIK 60 KVKLFDADTN TMGALAGSGI EVMVAIPNDL LKAMGSYQRA KDWVQRNVTR FNFNNGVKIK 120 YVAVGNEPFL TAYNGSYINL TYPALVNIQT ALNDAGIGDF IKATVPLNAD VYNSPPDNQV 180 PSAGRFRSDI IQEMTLIVNF LAQNKAPFTV NIYPFLSLYL SSDFPFDYAF FDGQNTINDN 240 GVIYTNVLDA NFDTLLASLN ALNHGDMEVI VGEVGWPTDG DKNANVPNAE RFYSGLLPRL 300 ANNVGTPMRK SYIEVYLFGF IDEDAKSVAP GNFERHWGLF KFDGQPKFPV DFQGQGQKRF 360 LTGAQNVQYL LNQWCMFNPN GRGNISKLGD NIDYACSLSD CTALGYGSSC GNLDANGNAS 420 YAFNMYFQVQ NQEAQACDFE GLATITTRNI SQGQCNFPIQ IGEPSSGHYD YSYGSSVRLA 480 LVISGFVFLL MTQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 227 | 343 | 121 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-19 | 373 | 444 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-30 | 373 | 457 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-74 | 33 | 352 | 324 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS99718.1 | 0 | 34 | 461 | 26 | 452 | At1g64760 [Arabidopsis thaliana] |
RefSeq | NP_176656.1 | 0 | 34 | 461 | 26 | 452 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_179534.1 | 0 | 30 | 461 | 18 | 448 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_187051.3 | 0 | 1 | 491 | 1 | 491 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_197323.1 | 0 | 1 | 473 | 1 | 471 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 33 | 352 | 3 | 314 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3ur8_A | 0 | 33 | 352 | 3 | 314 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3ur7_B | 0 | 33 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 33 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 33 | 352 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |