| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10020660m |
| Family | CBM43 |
| Protein Properties | Length: 471 Molecular Weight: 51737.2 Isoelectric Point: 8.5779 |
| Chromosome | Chromosome/Scaffold: 13 Start: 7061835 End: 7064014 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 380 | 463 | 2.4e-26 |
| WCVVAKGANWTQLGDALSYACSQGNNTCDPIKPGGPCHKPDLTILHASYAFSSYWASFRKTGATCSFNGLATQTIKDPTGYGRC | |||
| GH17 | 34 | 354 | 0 |
| GINYGQLGNNLPSPSDSVKLIKSLNAKRVKLYDANPTILAALNATDIAVSVMVPNQLIVNISKSDSLSDDWIRSNILPFYPDTKIRYLLVGNEILSSTDS ELKSALVPAMRKIQRSLKTLGVKKVKVGTSLAVDVLQSSFPPSSGEFRSDISGSVMKPMLQFLNRTKSFLFVDVYPYFAWAQDPTHVDLGYAIFESSNVT VTDPVTNLTYHNLFDQMIDSFVFAMKRLGYPDLRIWVAETGWPNNGDYDQIGANIYNAATYNRNVIKKFAAEPPVGTPARPGEVLPAFIFALYNENQKTG PGTERHFGLLHPNGTQVYEIE | |||
| Full Sequence |
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| Protein Sequence Length: 471 Download |
| MKMCYQLFIM SLLHLLALSL LISVSGAKFS GRPGINYGQL GNNLPSPSDS VKLIKSLNAK 60 RVKLYDANPT ILAALNATDI AVSVMVPNQL IVNISKSDSL SDDWIRSNIL PFYPDTKIRY 120 LLVGNEILSS TDSELKSALV PAMRKIQRSL KTLGVKKVKV GTSLAVDVLQ SSFPPSSGEF 180 RSDISGSVMK PMLQFLNRTK SFLFVDVYPY FAWAQDPTHV DLGYAIFESS NVTVTDPVTN 240 LTYHNLFDQM IDSFVFAMKR LGYPDLRIWV AETGWPNNGD YDQIGANIYN AATYNRNVIK 300 KFAAEPPVGT PARPGEVLPA FIFALYNENQ KTGPGTERHF GLLHPNGTQV YEIELSGKTT 360 EFKESLPAPE NNEVYKGKIW CVVAKGANWT QLGDALSYAC SQGNNTCDPI KPGGPCHKPD 420 LTILHASYAF SSYWASFRKT GATCSFNGLA TQTIKDPTGY GRCEFPSVTL * 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.008 | 268 | 343 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 4.0e-11 | 380 | 451 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-23 | 380 | 465 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-107 | 34 | 353 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF20214.1 | 0 | 22 | 470 | 14 | 440 | AC012395_1 putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
| GenBank | AAM65039.1 | 0 | 22 | 470 | 14 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 15 | 470 | 11 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 22 | 470 | 14 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002334812.1 | 0 | 10 | 470 | 4 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 34 | 355 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 34 | 355 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 34 | 355 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 34 | 355 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 34 | 355 | 2 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
