| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10021094m |
| Family | GH19 |
| Protein Properties | Length: 336 Molecular Weight: 36825.5 Isoelectric Point: 6.5875 |
| Chromosome | Chromosome/Scaffold: 13 Start: 3573990 End: 3575317 |
| Description | chitinase-like protein 2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH19 | 68 | 312 | 0 |
| ISDFFETYQFENLFSKRNSPVAHAVGFWDYRSFITAAAEYQPLGFGTAGEKLQGMKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKEMSPDQLYCDD YYKLTYPCTPGVSYHGRGALPVYWNYNYGQTGEALKADLLSHPEYLENNATLAFQAAIWRWMTPPKKHIPSAHDVFIGKWKPTKNDTAAKRSPGFGATIN VLYGDQMCNSGFDNDEMNNIVSHYLYYLDLMGVGREEAGPHETLS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 336 Download |
| MVSKPLLFLL LLALALVVFQ TKSLANAEDS ESSSSAKKPL VKIVKGKKLC DKGWECKGWS 60 EYCCNHTISD FFETYQFENL FSKRNSPVAH AVGFWDYRSF ITAAAEYQPL GFGTAGEKLQ 120 GMKEVAAFLG HVGSKTSCGY GVATGGPLAW GLCYNKEMSP DQLYCDDYYK LTYPCTPGVS 180 YHGRGALPVY WNYNYGQTGE ALKADLLSHP EYLENNATLA FQAAIWRWMT PPKKHIPSAH 240 DVFIGKWKPT KNDTAAKRSP GFGATINVLY GDQMCNSGFD NDEMNNIVSH YLYYLDLMGV 300 GREEAGPHET LSCADQEPFS SSSSSSAPPS SGSSS* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00182 | Glyco_hydro_19 | 2.0e-62 | 76 | 313 | 240 | + Chitinase class I. | ||
| cd00325 | chitinase_glyco_hydro_19 | 8.0e-96 | 72 | 313 | 242 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004568 | chitinase activity |
| GO:0006032 | chitin catabolic process |
| GO:0016998 | cell wall macromolecule catabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL06524.1 | 0 | 1 | 319 | 1 | 319 | AF412071_1 AT3g16920/K14A17_4 [Arabidopsis thaliana] |
| GenBank | AAQ56599.1 | 0 | 8 | 326 | 5 | 313 | chitinase-like protein [Gossypium hirsutum] |
| GenBank | ABL86685.1 | 0 | 1 | 320 | 1 | 305 | CLT3 [Gossypium barbadense] |
| GenBank | ACM45714.1 | 0 | 8 | 320 | 5 | 312 | class II chitinase [Pyrus pyrifolia] |
| RefSeq | NP_188317.2 | 0 | 1 | 319 | 16 | 334 | chitinase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cql_B | 0 | 68 | 319 | 2 | 242 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
| PDB | 3cql_A | 0 | 68 | 319 | 2 | 242 | A Chain A, Crystal Structure Of Gh Family 19 Chitinase From Carica Papaya |
| PDB | 1dxj_A | 0 | 68 | 319 | 2 | 240 | A Chain A, Structure Of The Chitinase From Jack Bean |
| PDB | 2z37_D | 0 | 68 | 320 | 2 | 244 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
| PDB | 2z37_C | 0 | 68 | 320 | 2 | 244 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3) |
