| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10021149m |
| Family | GH19 |
| Protein Properties | Length: 323 Molecular Weight: 34902 Isoelectric Point: 7.0709 |
| Chromosome | Chromosome/Scaffold: 13 Start: 5394706 End: 5396194 |
| Description | basic chitinase |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH19 | 73 | 305 | 0 |
| GIISRSQFDDMLKHRNDGACPARGFYTYDAFLTAAKSFPGFGTTGDTAARKKEIAAFFGQTSHETTGGWPTAPDGPYAWGYCFKQEQNPSSDYCSPSATW PCASGKRYYGRGPMQLTWNYNYGQCGRAIGADLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVISGQWQPSDADRAAGRLPGYGVITNIINGGLE CGRGQDSRVADRIGFYQRYCNIFGVNPGANLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 323 Download |
| MKTYLLFFTI FSSLLISFSS AEQCGRQAGG ALCPNGLCCS EFGWCGDTEA YCKQPGCQSQ 60 CTPGGTPTGD LSGIISRSQF DDMLKHRNDG ACPARGFYTY DAFLTAAKSF PGFGTTGDTA 120 ARKKEIAAFF GQTSHETTGG WPTAPDGPYA WGYCFKQEQN PSSDYCSPSA TWPCASGKRY 180 YGRGPMQLTW NYNYGQCGRA IGADLLNNPD LVSNDPVIAF KAAIWFWMTP QSPKPSCHAV 240 ISGQWQPSDA DRAAGRLPGY GVITNIINGG LECGRGQDSR VADRIGFYQR YCNIFGVNPG 300 ANLDCYNQRS FASVNFFLDA AI* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00187 | Chitin_bind_1 | 6.0e-14 | 23 | 61 | 39 | + Chitin recognition protein. | ||
| cd06921 | ChtBD1_GH19_hevein | 7.0e-15 | 22 | 61 | 40 | + Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl hydrolases or with barwin domains. This subfamily includes Hevein, a major IgE-binding allergen in natural rubber latex. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements. | ||
| cd00442 | lysozyme_like | 3.0e-16 | 127 | 267 | 141 | + lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. All the members are involved in the hydrolysis of beta-1,4- linked polysaccharides. | ||
| cd00325 | chitinase_glyco_hydro_19 | 2.0e-145 | 75 | 305 | 231 | + Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases but they are smaller in size due to certain deletions. Despite any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the procaryotic/eucaryotic divergence. | ||
| pfam00182 | Glyco_hydro_19 | 2.0e-155 | 74 | 305 | 232 | + Chitinase class I. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004568 | chitinase activity |
| GO:0006032 | chitin catabolic process |
| GO:0008061 | chitin binding |
| GO:0016998 | cell wall macromolecule catabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF69773.1 | 0 | 19 | 312 | 14 | 308 | AF135133_1 class I chitinase [Arabis blepharophylla] |
| DDBJ | BAA82814.1 | 0 | 21 | 322 | 33 | 335 | basic endochitinase [Arabidopsis thaliana] |
| RefSeq | NP_566426.1 | 0 | 21 | 322 | 20 | 322 | ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE); chitinase [Arabidopsis thaliana] |
| Swiss-Prot | P19171 | 0 | 21 | 322 | 33 | 335 | CHIB_ARATH RecName: Full=Basic endochitinase B; AltName: Full=Pathogenesis-related protein 3; Short=PR-3; Short=AtChiB; Flags: Precursor |
| Swiss-Prot | Q09023 | 0 | 21 | 322 | 20 | 322 | CHI2_BRANA RecName: Full=Endochitinase CH25; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3iwr_B | 0 | 22 | 313 | 2 | 300 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 3iwr_A | 0 | 22 | 313 | 2 | 300 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 2dkv_A | 0 | 22 | 313 | 2 | 300 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
| PDB | 4dyg_B | 0 | 71 | 312 | 3 | 244 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
| PDB | 4dyg_A | 0 | 71 | 312 | 3 | 244 | A Chain A, Crystal Structure Of Class I Chitinase From Oryza Sativa L. Japonica |
