Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10022003m |
Family | CE8 |
Protein Properties | Length: 588 Molecular Weight: 64612.5 Isoelectric Point: 9.359 |
Chromosome | Chromosome/Scaffold: 13 Start: 4598901 End: 4600801 |
Description | pectin methylesterase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 282 | 573 | 0 |
NVTVAADGSGDVKTVNEAVAKVPSKSNTMFVIYVKAGTYVENVVMDKSKWNVMIYGDGKSKTIISGSKNYADGTKTYETATFGVQGKGFIMKDIGIINTA GPEKHQAVAFRSGSDHSVYYRCSFDGYQDTLYPHSNRQFYRDCDVTGTVDFIFGNAAVVFQNCDIMPRQPFSKQFNTITAQGKTDDNQNTGISIQRCRIS AKGKVTAETYLGRPWKKYSTTVVMQSEIGPIVNPAGWVRWDVGVEPKKILYGEYRNFGRGSGLSQRVKWAAYKPVMSDAEAARFTVAAFIQG |
Full Sequence |
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Protein Sequence Length: 588 Download |
MDTLKVIKGY FKVDEAQDVE LKRKTWRQWL LVGISVVALL AITIGVVVHS RKNNSHGSTL 60 SSTPNLTPAA SLKTVCSVTH FPASCMSSIS NIPSSNTTDP EVLFRLSLKV VVDELASIST 120 LPKKLSEETD DESIKSALGV CGELLDNAMD SLNETVSAMD VRDGKNILNP TKIDDLKTWL 180 SAALTYHETC FDALDELRSN NNMTTTENYA NSTISRNLKS AMRNSTEFTS NSLAIVAKVL 240 STLSDFGIPI HRRRLLGSKP FFPRWVCPRV RKLLSAENVT PNVTVAADGS GDVKTVNEAV 300 AKVPSKSNTM FVIYVKAGTY VENVVMDKSK WNVMIYGDGK SKTIISGSKN YADGTKTYET 360 ATFGVQGKGF IMKDIGIINT AGPEKHQAVA FRSGSDHSVY YRCSFDGYQD TLYPHSNRQF 420 YRDCDVTGTV DFIFGNAAVV FQNCDIMPRQ PFSKQFNTIT AQGKTDDNQN TGISIQRCRI 480 SAKGKVTAET YLGRPWKKYS TTVVMQSEIG PIVNPAGWVR WDVGVEPKKI LYGEYRNFGR 540 GSGLSQRVKW AAYKPVMSDA EAARFTVAAF IQGNKWLPAS GVPNQLT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 9.0e-160 | 20 | 582 | 575 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-162 | 60 | 582 | 532 | + pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 1 | 587 | 596 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 8 | 583 | 589 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 282 | 574 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM65650.1 | 0 | 1 | 587 | 1 | 586 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_175787.1 | 0 | 1 | 587 | 1 | 586 | ATPME1; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_188047.1 | 0 | 1 | 279 | 1 | 274 | ATPMEPCRC; pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_188047.1 | 0 | 40 | 583 | 428 | 966 | ATPMEPCRC; pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002304256.1 | 0 | 1 | 585 | 1 | 585 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 279 | 586 | 5 | 317 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 279 | 582 | 1 | 309 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-21 | 294 | 578 | 19 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-21 | 294 | 578 | 19 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-21 | 294 | 578 | 19 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |