| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10022550m |
| Family | GH35 |
| Protein Properties | Length: 847 Molecular Weight: 95789.5 Isoelectric Point: 9.4652 |
| Chromosome | Chromosome/Scaffold: 11 Start: 2831911 End: 2836129 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 50 | 354 | 0 |
| LIINGKRELIYSGSIHYPRSTPEMWPNIIKRAKQGGLNTIQTYVFWNIHEYEQGKFNFSGRADLVKFIKLIEKNGMYVTLRLGPFIQAEWTHGGLPYWLR EVPGIFFRTDNEPFKEHTERYVRVILDKMKEEKLFASQGGPIILGQIENEYSAVQRAYKEDGLNYIKWAAKLVHSMNLGIPWVMCKQNDAPDPMINACNG RHCGDTFPGPNKDHKPSLWTENWTTQFRVFGDPPTQRSAEDIAFSVARFFSKNGSHVNYYMYHGGTNFGRTSAHYVTTRYYDDAPLDEFGLEKEPKYGHL KHLHN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 847 Download |
| MRIHSSNHSW LLLAILVILL SFSGALSSAN EEKTTSKNKK KEVTYDGTSL IINGKRELIY 60 SGSIHYPRST PEMWPNIIKR AKQGGLNTIQ TYVFWNIHEY EQGKFNFSGR ADLVKFIKLI 120 EKNGMYVTLR LGPFIQAEWT HGGLPYWLRE VPGIFFRTDN EPFKEHTERY VRVILDKMKE 180 EKLFASQGGP IILGQIENEY SAVQRAYKED GLNYIKWAAK LVHSMNLGIP WVMCKQNDAP 240 DPMINACNGR HCGDTFPGPN KDHKPSLWTE NWTTQFRVFG DPPTQRSAED IAFSVARFFS 300 KNGSHVNYYM YHGGTNFGRT SAHYVTTRYY DDAPLDEFGL EKEPKYGHLK HLHNALNLCK 360 KALLWGQSRT EKPGKETEIR YYEQPGTKVC AAFLANNNTE SAEKIKFKGK EYVIPPRSIS 420 ILPDCKTVVY NTKEIVSHHT ARNFVKSKKA NKQFDFKVFT ETVPSKLKGD SYVPVELYGL 480 TKDETDYGWY TTNFEIDDNE LKKKGVKPTL RIASLGHALH VWLNGEYIGN GHGSHEEKSF 540 VFLKPVSLKE GENHLTLLGV LTGFPDSGSY MEHRYTGPRS VSILGLSSGT LDLTEKSKWG 600 NKVGMEGERL GIHAEKGLKK VKWEKFSKKA PGLTWYQTYF DAPESQSATA IRMNGMGKGL 660 IWVNGEGVGR YWMSFLSPLG KPTQIEYHIP RSFLKPKKNL LVIFEEEPNV KPELIDFVIV 720 NRDTVCTYIG EEYTPSVRHW TKKNDQVQAI GDDVHLTANL KCSGTKKISA VEFASFGNPT 780 GSCGNFTLGS CNAPVSKQVI EKYCLGKAEC VIPVNKSMFQ QDKKDSCPKV VKTLAVQVKC 840 GRDKKN* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-7 | 71 | 200 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 7.0e-19 | 760 | 840 | 84 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 4.0e-21 | 43 | 318 | 306 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 5.0e-150 | 49 | 356 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 43 | 840 | 829 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD24606.1 | 0 | 46 | 846 | 31 | 832 | putative beta-galactosidase [Arabidopsis thaliana] |
| EMBL | CAA17766.1 | 0 | 41 | 846 | 52 | 831 | beta-galactosidase-like protein [Arabidopsis thaliana] |
| EMBL | CAB64750.1 | 0 | 2 | 840 | 6 | 837 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_179264.2 | 0 | 42 | 846 | 43 | 848 | BGAL13; beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_567973.1 | 0 | 41 | 846 | 39 | 845 | BGAL11 (beta-galactosidase 11); beta-galactosidase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3.00004e-41 | 49 | 352 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-34 | 36 | 352 | 4 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-34 | 36 | 352 | 4 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
