Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10023172m |
Family | GH10 |
Protein Properties | Length: 328 Molecular Weight: 38227.7 Isoelectric Point: 8.0366 |
Chromosome | Chromosome/Scaffold: 11 Start: 3567510 End: 3569079 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 40 | 291 | 8.3e-37 |
PSILLGCAMNYRILESNSYKEWFVSRFRLTSFTNEMKWYTTETVRGQENYTLADSMMKLTEENNNFQPTWVKKSKDPKDLKNVTINRINSVMKRYKGRVI GWDVMNENVHYSYYEDMLGKNASSMFYSLASELDPELFFFAYFHEYNTIEYARESVGSLINVKKKMEEIIIPRKQDDQRRNSQAHFLPTQPNLSYMRSAL DTLGSLGFPVWLTEVDMPKYPNQVKYMEDILREAYSHPAVSGFSKLTLADNH |
Full Sequence |
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Protein Sequence Length: 328 Download |
MVYLCGVETN PNKNKVRFQL SFQNKSAVNR SLISIKQIKP SILLGCAMNY RILESNSYKE 60 WFVSRFRLTS FTNEMKWYTT ETVRGQENYT LADSMMKLTE ENNNFQPTWV KKSKDPKDLK 120 NVTINRINSV MKRYKGRVIG WDVMNENVHY SYYEDMLGKN ASSMFYSLAS ELDPELFFFA 180 YFHEYNTIEY ARESVGSLIN VKKKMEEIII PRKQDDQRRN SQAHFLPTQP NLSYMRSALD 240 TLGSLGFPVW LTEVDMPKYP NQVKYMEDIL REAYSHPAVS GFSKLTLADN HFKNTEVGDL 300 IDMLLKECLE VTKEMGHFQV VQLEIDA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 2.0e-19 | 73 | 275 | 228 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 2.0e-28 | 34 | 283 | 287 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 4.0e-50 | 75 | 301 | 278 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC69373.1 | 0 | 13 | 327 | 161 | 552 | 1,4-beta-xylan endohydrolase [Arabidopsis thaliana] |
GenBank | AAQ65190.1 | 0 | 13 | 327 | 138 | 529 | At2g14690 [Arabidopsis thaliana] |
EMBL | CAA19864.1 | 0 | 13 | 315 | 162 | 488 | putative protein [Arabidopsis thaliana] |
RefSeq | NP_179076.3 | 0 | 13 | 327 | 179 | 570 | endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_195107.1 | 0 | 13 | 327 | 153 | 536 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1tux_A | 0.00000000000002 | 27 | 256 | 1 | 240 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 0.00000000000002 | 30 | 256 | 4 | 240 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1i1x_A | 0.00000000000002 | 30 | 256 | 4 | 240 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1i1w_A | 0.00000000000002 | 30 | 256 | 4 | 240 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1gor_A | 0.00000000000006 | 30 | 256 | 4 | 240 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EV212677 | 230 | 49 | 263 | 0 |
EV212989 | 217 | 6 | 209 | 0 |
DV141191 | 253 | 33 | 270 | 0 |
EX266128 | 275 | 57 | 307 | 0 |
DY903643 | 163 | 25 | 174 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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