| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10023353m |
| Family | CBM49 |
| Protein Properties | Length: 620 Molecular Weight: 68477.4 Isoelectric Point: 9.9076 |
| Chromosome | Chromosome/Scaffold: 8 Start: 188159 End: 192315 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM49 | 527 | 604 | 5e-36 |
| VAIVQKMTSSWVSKGRTYYRYSTTVINKSPRALKSVNLSIKNLYGPIWGLSRSGNSFGLPSWIHSLQSGKSLEFVYIH | |||
| GH9 | 24 | 485 | 0 |
| DYGQALSKSLLFFEAQRSGVLPRNQRVTWRSHSGLNDGKSSGVNLVGGYYDAGDNVKFGLPMAFTVTMMAWSVIEYGNQLAANGELGHSIDAIKWGTDYF IKAHPEPNVLYGEVGDGNTDHYCWQRPEEMTTDRKAYRIDPSNPGSDLAGETAAAMAAASIVFRRSNPAYSRLLLTHAYQLFNFADKYRGKYDSSITVAQ KYYRSVSGYNDELLWAAAWLYQASNNQFYLDYLGRNGDSMGGTGWSMTEFGWDVKYAGVQTLVAKFLMQGKAGRHTPVFQRFQQKADFFMCSLLGKGLRN IQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLTSSRSNLRCSSGNVAPSQLLSFAKSQVDYILGDNPRATSYMVGYGNNFPQRVHHRGSSIVSYKVDR TFVTCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADRRDNYEQTEPATYNNAPLLGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 620 Download |
| MEKSASVAAL LLLLCFPVAF SGHDYGQALS KSLLFFEAQR SGVLPRNQRV TWRSHSGLND 60 GKSSGVNLVG GYYDAGDNVK FGLPMAFTVT MMAWSVIEYG NQLAANGELG HSIDAIKWGT 120 DYFIKAHPEP NVLYGEVGDG NTDHYCWQRP EEMTTDRKAY RIDPSNPGSD LAGETAAAMA 180 AASIVFRRSN PAYSRLLLTH AYQLFNFADK YRGKYDSSIT VAQKYYRSVS GYNDELLWAA 240 AWLYQASNNQ FYLDYLGRNG DSMGGTGWSM TEFGWDVKYA GVQTLVAKFL MQGKAGRHTP 300 VFQRFQQKAD FFMCSLLGKG LRNIQKTPGG LIFRQRWNNM QFVTSASFLT TVYSDYLTSS 360 RSNLRCSSGN VAPSQLLSFA KSQVDYILGD NPRATSYMVG YGNNFPQRVH HRGSSIVSYK 420 VDRTFVTCRG GYATWFSRKG SDPNLLTGAI VGGPDAYDNF ADRRDNYEQT EPATYNNAPL 480 LGVLARLSSG HSGYSQLLPV VPAPVVRRPM PIRKPKVTSP VRASGPVAIV QKMTSSWVSK 540 GRTYYRYSTT VINKSPRALK SVNLSIKNLY GPIWGLSRSG NSFGLPSWIH SLQSGKSLEF 600 VYIHSTSPAN VAVSNYTLA* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 0 | 15 | 619 | 609 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 18 | 616 | 604 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 22 | 487 | 468 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 24 | 488 | 465 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 24 | 485 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN31840.1 | 0 | 1 | 619 | 1 | 620 | putative endo-beta-1,4-glucanase [Arabidopsis thaliana] |
| EMBL | CAC94006.1 | 0 | 22 | 619 | 25 | 620 | endo-beta-1,4-glucanase [Fragaria x ananassa] |
| RefSeq | NP_176621.1 | 0 | 1 | 619 | 1 | 620 | AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002299478.1 | 0 | 6 | 619 | 9 | 622 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303645.1 | 0 | 21 | 618 | 24 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 23 | 487 | 3 | 428 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1ksc_A | 0 | 23 | 487 | 3 | 428 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1ks8_A | 0 | 23 | 487 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 17 | 487 | 18 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 24 | 540 | 5 | 492 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
