| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10023358m |
| Family | GT47 |
| Protein Properties | Length: 601 Molecular Weight: 68758.2 Isoelectric Point: 7.4406 |
| Chromosome | Chromosome/Scaffold: 8 Start: 967306 End: 969200 |
| Description | root hair specific 8 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 247 | 532 | 0 |
| SCEGKGVYVYDLPSKFNKDLLGECSDMVPWANFCSFFKNDAFGESIENLGKGWFKTNQYSLEPIFHSRVLKHPCRVYDENQAKLFYVPFYGGIDVLRWHF KNVSEDVKDVLAIEVVKWLGSKKSWRRNSGKDHVFVLGKISWDFRRNNKFSWGSSLLEMQEMKNPTKLLIERNPWEVNDVAIPHPTFFHPKTDDEISSWQ NKIIVKPRRSLISFAGGARPGNPDSIRSTLIDQCTSFPNQCRFLNCTDGGCDKPESIIELFQDSEFCLQPPGDSPTRKSVFDSLVS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 601 Download |
| MPISVSKRRP RSSKKTETEK PEKSLKDPRI WCGNICSRSI LYRVPLTILF LFLIYLWSTS 60 TTVISGNVLH ICISSRKLND LYCLTAGSQP GSRVALSNFT KPVSENVIRS EEEKSVVVLG 120 KDGDKGFAKN ETFTGKRDSE EESVVGTSLN IIKNETSTGE RVSFLDQDFK LTHEENLDSI 180 LVQDSEPKNE INPDLLVDWG LETGEYRYRY INSKDEDEET ALKAVDKYLQ IQRSWLSMGK 240 NHEKTVSCEG KGVYVYDLPS KFNKDLLGEC SDMVPWANFC SFFKNDAFGE SIENLGKGWF 300 KTNQYSLEPI FHSRVLKHPC RVYDENQAKL FYVPFYGGID VLRWHFKNVS EDVKDVLAIE 360 VVKWLGSKKS WRRNSGKDHV FVLGKISWDF RRNNKFSWGS SLLEMQEMKN PTKLLIERNP 420 WEVNDVAIPH PTFFHPKTDD EISSWQNKII VKPRRSLISF AGGARPGNPD SIRSTLIDQC 480 TSFPNQCRFL NCTDGGCDKP ESIIELFQDS EFCLQPPGDS PTRKSVFDSL VSEDLKAKKV 540 NVIEKLMSKT LREREDMRSY IVHELLPGLV YGDSNAKFER FRDAFDITMD SLLHKISKNL 600 * 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 4.0e-56 | 247 | 532 | 298 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_176534.2 | 0 | 1 | 600 | 24 | 664 | catalytic [Arabidopsis thaliana] |
| RefSeq | NP_198941.1 | 0 | 5 | 600 | 2 | 560 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002269913.1 | 0 | 212 | 598 | 121 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299537.1 | 0 | 1 | 598 | 1 | 571 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509789.1 | 0 | 67 | 598 | 58 | 565 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
