| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10024297m |
| Family | GT5 |
| Protein Properties | Length: 1040 Molecular Weight: 117921 Isoelectric Point: 6.1991 |
| Chromosome | Chromosome/Scaffold: 1 Start: 9569135 End: 9574019 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 543 | 1026 | 0 |
| VVHIAAEMAPVAKVGGLGDVVAGLGKALQRRGHLVEIILPKYDCMQYDRVRDLRALDTVVESYFDGKLYKNKIWVGTVEGLPVHFIEPQHPSKFFWRGQF YGEQDDFKRFSYFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDVYAPKGLDSARICFTCHNFEYQGTSSASELGSCGLDVHQLNRPDRMQDHSSGD RVNPVKGAIIFSNIVTTVSPTYAQEVRTPEGGKGLHSTLNSHSKKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKYALRKQLGLSSAESRRPL VGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKTHDHVRLLLKYDEALSHSIYAASDLFIIPSIFEPCGLTQMIAMRYGS IPIARKTGGLNDSVFDIDDDTIPTQFQNGFTFQTADEQGLNYALERAFNHYKKDEEKWTRLKEKVMSIDFSWASSATQYEELYT | |||
| Full Sequence |
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| Protein Sequence Length: 1040 Download |
| MTTKLSSYFL THGLAGISCE REHGSSRRFF CVPSRRLLPA SCKIRQQRGF DSNKRQEIKK 60 GSPKPILPIN SSLQSNNDEE SEPENGSAES VSSVKSDAEK GNDIHATIDI NHADENTEKR 120 DDIQKTEVTR PKNKSAKKKD ENVHATVDIE HDDVQNLNKL TVPEVAKALS INKSGGEQFS 180 DGQYGELMTM IRNAEKNILR LDQARATALD DLNKILSEKE ALQGEISVLE MKLAETDERI 240 KTAAQEKVRV GILEEQLEKL RHEMLSPLES DGYILALSKE LETLKIENQS LRKDLELLKS 300 ELQSVKNTDE RVVVLEKECS GLKFSVKDLE SKLSVSQEDV SKLSTLKTEC TDLWAKVESL 360 QLLLDRATKQ AEQAVLVLQQ NQDLRDKVDK IEESLKEANV YKESSEKIQQ YNELMQHKVR 420 LLEERLEKSD AEIFSYVQLY QESIKEFQET LESLKEESKR KARDEPVDDM PWDYWSRLLL 480 TVDGWLLEKK IASDDADSLR EMVWKKDRRI HDTYIDVKDK TERDAISAFL KLVASPTSPG 540 LYVVHIAAEM APVAKVGGLG DVVAGLGKAL QRRGHLVEII LPKYDCMQYD RVRDLRALDT 600 VVESYFDGKL YKNKIWVGTV EGLPVHFIEP QHPSKFFWRG QFYGEQDDFK RFSYFSRAAL 660 ELLLQSGKKP DIIHCHDWQT AFVAPLYWDV YAPKGLDSAR ICFTCHNFEY QGTSSASELG 720 SCGLDVHQLN RPDRMQDHSS GDRVNPVKGA IIFSNIVTTV SPTYAQEVRT PEGGKGLHST 780 LNSHSKKFIG ILNGIDTDSW NPATDPFLKA QFNAKDLQGK EENKYALRKQ LGLSSAESRR 840 PLVGCITRLV PQKGVHLIRH AIYRTLELGG QFVLLGSSPV PHIQREFEGI EQQFKTHDHV 900 RLLLKYDEAL SHSIYAASDL FIIPSIFEPC GLTQMIAMRY GSIPIARKTG GLNDSVFDID 960 DDTIPTQFQN GFTFQTADEQ GLNYALERAF NHYKKDEEKW TRLKEKVMSI DFSWASSATQ 1020 YEELYTRSVA RARASANRT* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 2.0e-142 | 539 | 1025 | 494 | + synthase/transferase | ||
| PLN02939 | PLN02939 | 0 | 1 | 1026 | 1027 | + transferase, transferring glycosyl groups | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 543 | 1025 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 541 | 1026 | 489 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 0 | 541 | 1025 | 487 | + glycogen synthase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA16796.1 | 0 | 1 | 1039 | 1 | 1071 | starch synthase-like protein [Arabidopsis thaliana] |
| EMBL | CAB40375.1 | 0 | 190 | 1035 | 1 | 871 | starch synthase, isoform V [Vigna unguiculata] |
| RefSeq | NP_193558.3 | 0 | 1 | 1039 | 1 | 1040 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 1 | 1036 | 1 | 1009 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 153 | 1038 | 1 | 887 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 543 | 1027 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 543 | 1027 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 543 | 1027 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 543 | 1027 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 543 | 1027 | 3 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO851132 | 333 | 616 | 948 | 0 |
| CF828776 | 286 | 666 | 951 | 0 |
| GW865616 | 298 | 647 | 944 | 0 |
| EL448877 | 316 | 469 | 784 | 0 |
| CB893818 | 281 | 540 | 820 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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