| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10024528m |
| Family | AA3 |
| Protein Properties | Length: 729 Molecular Weight: 80085.8 Isoelectric Point: 7.6947 |
| Chromosome | Chromosome/Scaffold: 1 Start: 8883846 End: 8888164 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 201 | 713 | 0 |
| GFRVLTQKRNKNGSSISDPVMTIQCDAVVVGSGSGGGVVAGVLAKAGYKVLVVEKGNYYARNKLSLLEGQAMDEMYLSGGLLATSDMNVVILAGSTVGGG STINWSASIKTPEHVMKEWSENSELEMFGSDLYRKAMDVVCERMGVQCGFVEEGFNNEILRKGCEELGLTVKNIPRNSPSDHYCGFCCLGCKKGQKQGTS ETWLVDLVKSGNGLILPGCEAMEVLYECQNGKKKKTATGLAFAFEEEVYVVESKATIVACGALRTPHLLKRSGLKNRNIGRNLCLHPVVMAWGWFPEEEK WPEKKKKSYEGGIMTAMSGVVNTETKTSYGETVIQTPALHPGMFSGIIPWTSGEEFKSRMLKFSRTAHVFTLLRDKGTGTVNSKSCIDYNLNDEDEESLK KGLERVLNILIAAGAEEIGTHNSEGKSLNVRTASEAEIERFVREESSKGLKDLAGQICSAHQMGSCRMGIRPEESAVRPTGETWEVGGLYVADTSVFPTA LGVNPMVTVQSIA | |||
| Full Sequence |
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| Protein Sequence Length: 729 Download |
| MESLVAICDT LIPSIDGSEV GHVDDGVAGY YSASASQTGA PDRVARLISE RLDHPKKWIL 60 RAAMWSLSTW IGSLVLCGRR SFTSEFPYFQ RFCRLPEKQR EEILLNWASS YFLLLRMLFR 120 SIKLITSLVF FTQVDEKGKN LAWKAIGYNG PSSDHSDHDE ELNEKKTKKK KPEEIFGPLY 180 NGIIDLKNPR EAVVKKLTGH GFRVLTQKRN KNGSSISDPV MTIQCDAVVV GSGSGGGVVA 240 GVLAKAGYKV LVVEKGNYYA RNKLSLLEGQ AMDEMYLSGG LLATSDMNVV ILAGSTVGGG 300 STINWSASIK TPEHVMKEWS ENSELEMFGS DLYRKAMDVV CERMGVQCGF VEEGFNNEIL 360 RKGCEELGLT VKNIPRNSPS DHYCGFCCLG CKKGQKQGTS ETWLVDLVKS GNGLILPGCE 420 AMEVLYECQN GKKKKTATGL AFAFEEEVYV VESKATIVAC GALRTPHLLK RSGLKNRNIG 480 RNLCLHPVVM AWGWFPEEEK WPEKKKKSYE GGIMTAMSGV VNTETKTSYG ETVIQTPALH 540 PGMFSGIIPW TSGEEFKSRM LKFSRTAHVF TLLRDKGTGT VNSKSCIDYN LNDEDEESLK 600 KGLERVLNIL IAAGAEEIGT HNSEGKSLNV RTASEAEIER FVREESSKGL KDLAGQICSA 660 HQMGSCRMGI RPEESAVRPT GETWEVGGLY VADTSVFPTA LGVNPMVTVQ SIAYCIGLNV 720 VDVLRRKI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 0.0004 | 634 | 699 | 67 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 1.0e-22 | 587 | 716 | 130 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-28 | 243 | 714 | 526 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 2.0e-76 | 272 | 488 | 223 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA18625.1 | 0.000000000006 | 1 | 44 | 43 | 86 | putative protein [Arabidopsis thaliana] |
| EMBL | CAA18625.1 | 0 | 133 | 727 | 85 | 677 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_193673.2 | 0 | 1 | 727 | 1 | 725 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 1 | 727 | 40 | 786 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 1 | 727 | 1 | 744 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ljp_B | 0.000001 | 360 | 725 | 170 | 527 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.000001 | 360 | 725 | 170 | 527 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3nne_H | 0.000003 | 360 | 725 | 170 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.000003 | 360 | 725 | 170 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.000003 | 360 | 725 | 170 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DC883850 | 463 | 272 | 727 | 0 |
| HO794753 | 744 | 1 | 724 | 0 |
| BX836801 | 303 | 389 | 691 | 0 |
| BX836801 | 51 | 674 | 724 | 2e-19 |
| BX836801 | 25 | 369 | 393 | 0.12 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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