| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10024717m |
| Family | AA3 |
| Protein Properties | Length: 601 Molecular Weight: 65552.9 Isoelectric Point: 6.0314 |
| Chromosome | Chromosome/Scaffold: 1 Start: 4954924 End: 4957562 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 80 | 598 | 0 |
| NGVHRIRCDAVIVGSGSGGGVAAANLAKAGLKVLVLEKGNYFAAQDYSALEGPSMQELYEKGGLMTTVDGKFMILAGSTVGGGTAVNWSASIRTPDHVLQ EWSERSKIEFFGSQEYQSAMDEVTRRIGVTERCVKEGFQNQVLREGCERLGLKVVSVPRNSPEDHYCGSCGYGCREGYKNGTDRTWLVDAVENGAVILTG VKAERFILVENTNSGNERKKRCVGVIASSVGGKMEKKFMIEARVTVSSAGSLLTPPLMLSSGLENRNIGRNLRLHPVLMTWGYFPEESSEFSGKMYEGGI ITSVHHINDGEKGCRAILENPLIGPASFAGLSPWVSGADLEERMMKYGRTAHVFALVRDNGSGEVMKESEVRYRTSKKDKENLRVGIRQALRVLVAAGAV EIGTYRSDGQRMKCEGVTREAVEEFLDRVDADGGVSTNREYWTTYFSAHQMGSCRMGHTEEEGAVDENGESWEAEGLFVCDGSVLPSAVGVNPMITIQSA AYCISKRIVDSLQRQKNKE | |||
| Full Sequence |
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| Protein Sequence Length: 601 Download |
| MNSSNLFVCS QTDENLKNPA LEAIGYSIAT TETSSNKTRK EEGTRRPLEA GIIETKHETD 60 ITITQSLIEK GVHVARDDDN GVHRIRCDAV IVGSGSGGGV AAANLAKAGL KVLVLEKGNY 120 FAAQDYSALE GPSMQELYEK GGLMTTVDGK FMILAGSTVG GGTAVNWSAS IRTPDHVLQE 180 WSERSKIEFF GSQEYQSAMD EVTRRIGVTE RCVKEGFQNQ VLREGCERLG LKVVSVPRNS 240 PEDHYCGSCG YGCREGYKNG TDRTWLVDAV ENGAVILTGV KAERFILVEN TNSGNERKKR 300 CVGVIASSVG GKMEKKFMIE ARVTVSSAGS LLTPPLMLSS GLENRNIGRN LRLHPVLMTW 360 GYFPEESSEF SGKMYEGGII TSVHHINDGE KGCRAILENP LIGPASFAGL SPWVSGADLE 420 ERMMKYGRTA HVFALVRDNG SGEVMKESEV RYRTSKKDKE NLRVGIRQAL RVLVAAGAVE 480 IGTYRSDGQR MKCEGVTREA VEEFLDRVDA DGGVSTNREY WTTYFSAHQM GSCRMGHTEE 540 EGAVDENGES WEAEGLFVCD GSVLPSAVGV NPMITIQSAA YCISKRIVDS LQRQKNKERL 600 * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| TIGR03970 | Rv0697 | 0.0001 | 449 | 576 | 129 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. |
| pfam05199 | GMC_oxred_C | 1.0e-22 | 449 | 583 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. |
| COG2303 | BetA | 2.0e-32 | 105 | 576 | 532 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] |
| pfam00732 | GMC_oxred_N | 7.0e-93 | 134 | 356 | 226 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK64154.1 | 0 | 6 | 594 | 157 | 745 | unknown protein [Arabidopsis thaliana] |
| GenBank | AAM63097.1 | 0 | 6 | 594 | 157 | 745 | unknown [Arabidopsis thaliana] |
| GenBank | ACF22878.1 | 0 | 5 | 591 | 139 | 716 | alcohol oxidase [Glycine max] |
| RefSeq | NP_194586.1 | 0 | 6 | 594 | 157 | 745 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002529832.1 | 0 | 10 | 593 | 167 | 743 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2gew_A | 0.00009 | 500 | 588 | 407 | 497 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4w_A | 0.00009 | 500 | 588 | 407 | 497 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 1n4v_A | 0.00009 | 500 | 588 | 407 | 497 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794753 | 592 | 6 | 596 | 0 |
| HO779224 | 451 | 56 | 506 | 0 |
| EX275136 | 292 | 294 | 585 | 0 |
| DK553119 | 229 | 368 | 596 | 0 |
| HO811216 | 324 | 269 | 591 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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