| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10024805m |
| Family | GH10 |
| Protein Properties | Length: 562 Molecular Weight: 63630.6 Isoelectric Point: 5.7778 |
| Chromosome | Chromosome/Scaffold: 1 Start: 176037 End: 178667 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH10 | 213 | 493 | 0 |
| ISKDFPIGSAISKTILRNIPYQEWFVKRFDATVFENELKWYATEPDRGRLNYTLADEMMNFVRAKRIIARGHNIFWEDPKYTPDWVRNLTGEDLRSAVSG RIRSLMTRYRGEFVHWDVSNEMLHFDFYESRLGENASYGFFEAAREIDSLATLFLNDFNVVETCIDERSTVDEYIARVRELQRYGDGGVRMDGVGLEGHF TVPNAALMRANLDKLATLELPIWLTEIDISSTLDHHTQAIYLEQVLREGFSHPSVNGIMLWTALHPNGCYQMCLTDDNFRN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 562 Download |
| MRHSSMSGLV FWTIFLLTAS TQAYYDGPFY DSTAYTECRA EPEKPLYNGG ILKDKEPSVS 60 GTDTLRSVGT RYTPAYILHN LTQNTIYCFS IWVKIEEGGA ASARVRARLR TENATLSCVG 120 SVSAKNGCWS FLKGGFLAHS PSQLSILFFE TSNDEGKIQI DVASASLQPF TQEQWRKNQD 180 YLINTARKRA VTIHVAGENG ESVQGAAVRV EQISKDFPIG SAISKTILRN IPYQEWFVKR 240 FDATVFENEL KWYATEPDRG RLNYTLADEM MNFVRAKRII ARGHNIFWED PKYTPDWVRN 300 LTGEDLRSAV SGRIRSLMTR YRGEFVHWDV SNEMLHFDFY ESRLGENASY GFFEAAREID 360 SLATLFLNDF NVVETCIDER STVDEYIARV RELQRYGDGG VRMDGVGLEG HFTVPNAALM 420 RANLDKLATL ELPIWLTEID ISSTLDHHTQ AIYLEQVLRE GFSHPSVNGI MLWTALHPNG 480 CYQMCLTDDN FRNLPAGDTV DKKLLEWKTG ELKATTDDHG SFSFFGFLGE YEVGIIYQGK 540 TVNSSFSLSR DPETKHVRLQ I* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 1.0e-36 | 202 | 442 | 254 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 2.0e-55 | 211 | 473 | 280 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-77 | 250 | 500 | 272 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB37521.1 | 0 | 140 | 561 | 6 | 433 | putative protein [Arabidopsis thaliana] |
| EMBL | CBI37893.1 | 0 | 26 | 561 | 100 | 625 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195577.2 | 0 | 13 | 561 | 18 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277675.1 | 0 | 23 | 561 | 21 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002534153.1 | 0 | 88 | 561 | 6 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1tux_A | 5e-27 | 241 | 496 | 40 | 293 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1nq6_A | 7e-27 | 219 | 473 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1i1x_A | 1e-26 | 241 | 506 | 40 | 303 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1i1w_A | 1e-26 | 241 | 506 | 40 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 2e-26 | 241 | 506 | 40 | 303 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
