| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10024842m |
| Family | GH14 |
| Protein Properties | Length: 549 Molecular Weight: 61458.3 Isoelectric Point: 6.9166 |
| Chromosome | Chromosome/Scaffold: 1 Start: 10245677 End: 10248003 |
| Description | chloroplast beta-amylase |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 88 | 502 | 0 |
| FVMLPLDTVTMSGHLNKPRAMNASLMALKGAGVEGVMVDAWWGLVEKDGPMKYNWEGYAELIQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDKSGRRNPEYISLGCDSVPVLRGRTPIQVYSDFMRSFRERFDSCIGGVIAEIQVGMGPCGELRYPSYPESNGTWSFPGIGEFQCYDKYMR SSLQAYAESIGKTNWGTSGPHDAGEYKNLPEDTEFFRRDGTWNSEYGKFFMEWYSEKLLEHGDRLLASAKGIFQGTGAKLSGKVAGIHWHYNTRSHAAEL TAGYYNTRNHDGYLPIAKMFNKHGVVLNFTCMEMKDGEQPEHANCSPEGLVKQVQNATRQAGTELAGENALERYDSSAFGQVVATNRSDSGNGLTAFTYL RMNKRLFEGQNWQQL | |||
| Full Sequence |
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| Protein Sequence Length: 549 Download |
| MELTLNSSSS LIKRKDTKSS RNQDNSSNMS FAMMKPPTYQ FQAKNSVKEM KFTHEKTFTP 60 EGETTERWEK LHVLSYPHPK SDASVPVFVM LPLDTVTMSG HLNKPRAMNA SLMALKGAGV 120 EGVMVDAWWG LVEKDGPMKY NWEGYAELIQ MVQKHGLKLQ VVMSFHQCGG NVGDSCSIPL 180 PPWVLEEISK NPDLVYTDKS GRRNPEYISL GCDSVPVLRG RTPIQVYSDF MRSFRERFDS 240 CIGGVIAEIQ VGMGPCGELR YPSYPESNGT WSFPGIGEFQ CYDKYMRSSL QAYAESIGKT 300 NWGTSGPHDA GEYKNLPEDT EFFRRDGTWN SEYGKFFMEW YSEKLLEHGD RLLASAKGIF 360 QGTGAKLSGK VAGIHWHYNT RSHAAELTAG YYNTRNHDGY LPIAKMFNKH GVVLNFTCME 420 MKDGEQPEHA NCSPEGLVKQ VQNATRQAGT ELAGENALER YDSSAFGQVV ATNRSDSGNG 480 LTAFTYLRMN KRLFEGQNWQ QLVEFVKNMK EGGHGKKLSE EDTTGSDLYV GFVRGKKITE 540 KVEEASLV* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 2.0e-149 | 85 | 516 | 439 | + beta-amylase | ||
| PLN02803 | PLN02803 | 0 | 1 | 548 | 549 | + beta-amylase | ||
| PLN00197 | PLN00197 | 0 | 85 | 521 | 443 | + beta-amylase; Provisional | ||
| pfam01373 | Glyco_hydro_14 | 0 | 88 | 505 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02801 | PLN02801 | 0 | 85 | 509 | 433 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB46051.1 | 0 | 50 | 548 | 1 | 498 | putative beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_567523.1 | 0 | 1 | 548 | 1 | 548 | CT-BMY (CHLOROPLAST BETA-AMYLASE); beta-amylase [Arabidopsis thaliana] |
| RefSeq | XP_002282871.1 | 0 | 1 | 548 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 548 | 1 | 547 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 545 | 1 | 546 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdp_A | 0 | 85 | 509 | 12 | 441 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1q6c_A | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1uko_D | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 85 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BU103692 | 453 | 85 | 537 | 0 |
| HO794833 | 412 | 123 | 534 | 0 |
| HO781538 | 405 | 29 | 432 | 0 |
| HO825836 | 375 | 159 | 533 | 0 |
| HO593646 | 413 | 105 | 512 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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