| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10024947m |
| Family | CBM43 |
| Protein Properties | Length: 514 Molecular Weight: 56069 Isoelectric Point: 6.7767 |
| Chromosome | Chromosome/Scaffold: 1 Start: 10192280 End: 10194159 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 357 | 436 | 3.6e-27 |
| WCVAHPSRDMTQVADHLRLACSQADCTTLNDGGSCSQLGEKENISYAFNSYYQLQMQNEKSCDFDGLGMVTFLDPSVGDC | |||
| GH17 | 23 | 336 | 0 |
| IGVNWGTVSFHKLRPSTVVDLLKANKITKVKLFDANPDALRALMGTGIQVMIGIPNEMLSTFSSDLFVQQNLSRFMGKGGADIRYIAVGNEPFLTSYGGQ FQNYVVPAMLNLQQSLVKANLASYVKLVVPCNADAYESNVPSQGMFRPELTQIMTQLVSFLNSNVSPFVVNIYPFLSLYGNSDFPQDYAFFEGSSHPVLD GPNAYYNAFDGNFDTLVAALAKLGYGQMPIVIGEIGWPTDGAVGANLTAARVFNQGLINHLLSNKGTPLRPGSPPADVYLFGLLDEGAKSTLPGNFERHW GIFSFDGQAKYRLN | |||
| Full Sequence |
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| Protein Sequence Length: 514 Download |
| MASGVALFTL SLLLVTHQVQ SAIGVNWGTV SFHKLRPSTV VDLLKANKIT KVKLFDANPD 60 ALRALMGTGI QVMIGIPNEM LSTFSSDLFV QQNLSRFMGK GGADIRYIAV GNEPFLTSYG 120 GQFQNYVVPA MLNLQQSLVK ANLASYVKLV VPCNADAYES NVPSQGMFRP ELTQIMTQLV 180 SFLNSNVSPF VVNIYPFLSL YGNSDFPQDY AFFEGSSHPV LDGPNAYYNA FDGNFDTLVA 240 ALAKLGYGQM PIVIGEIGWP TDGAVGANLT AARVFNQGLI NHLLSNKGTP LRPGSPPADV 300 YLFGLLDEGA KSTLPGNFER HWGIFSFDGQ AKYRLNLGLG NRGLKNAENV QYLPSRWCVA 360 HPSRDMTQVA DHLRLACSQA DCTTLNDGGS CSQLGEKENI SYAFNSYYQL QMQNEKSCDF 420 DGLGMVTFLD PSVGDCRFLV GVTDKGVSSG AEPMARWSIY HICIGVVVWA LSQYKSGDFS 480 HIFFSNNGPF FNMGPGISAT RFLRTLFQFS KVM* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 0.0009 | 162 | 328 | 181 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-18 | 356 | 425 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 7.0e-31 | 357 | 438 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 9.0e-71 | 23 | 333 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD65105.1 | 0 | 1 | 473 | 1 | 471 | glycosyl hydrolase family protein [Brassica oleracea] |
| EMBL | CAB10499.1 | 0 | 4 | 472 | 33 | 501 | glucanase like protein [Arabidopsis thaliana] |
| RefSeq | NP_193451.2 | 0 | 4 | 472 | 6 | 474 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002329964.1 | 0 | 20 | 469 | 26 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525026.1 | 0 | 6 | 463 | 7 | 468 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 4.2039e-45 | 38 | 337 | 17 | 315 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3f55_C | 4.2039e-45 | 38 | 337 | 17 | 315 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3f55_B | 4.2039e-45 | 38 | 337 | 17 | 315 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3f55_A | 4.2039e-45 | 38 | 337 | 17 | 315 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3em5_D | 4.2039e-45 | 38 | 337 | 17 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
