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Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10024968m |
Family | CBM43 |
Protein Properties | Length: 505 Molecular Weight: 53388.7 Isoelectric Point: 5.9124 |
Chromosome | Chromosome/Scaffold: 1 Start: 2348124 End: 2351466 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 370 | 451 | 5.8e-34 |
WCVPKKGATDEQLQASLDWACGQGIDCGPIQPGGACFEPNNVASHAAFAMNMYFQKSPKNPADCDFSQTATITSQNPSYNSC | |||
GH17 | 26 | 343 | 0 |
IGVNYGQVANNLPPPSETAKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLAADPNAATQWINSNVLPFYPASKIILITVGNEVLMSND PNLVNQLLPAMQNVQKALETVSLGGKIKVSTVHAMTVLGNSEPPSSGSFASVYQTGLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFQPNPG RPDVNTGIKYMNMFDAQVDAVHSALKSMGFEKVEIVVAETGWASRGDTNEVGPSVDNAKAYNGNLIAHLRSMVGTPLMPGKSVDTYIFALYDENLKPGPS SERAFGLFKTDLSMAYDV |
Full Sequence |
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Protein Sequence Length: 505 Download |
MAISISLSLL LIFFSHFPSS HAEPFIGVNY GQVANNLPPP SETAKLLQST SIQKVRLYGA 60 DPAIIKALAG TGVGIVIGAA NGDVPSLAAD PNAATQWINS NVLPFYPASK IILITVGNEV 120 LMSNDPNLVN QLLPAMQNVQ KALETVSLGG KIKVSTVHAM TVLGNSEPPS SGSFASVYQT 180 GLKGILQFLS DTGSPFAINP YPFFAYQSDP RPETLAFCLF QPNPGRPDVN TGIKYMNMFD 240 AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDTNEVGPSV DNAKAYNGNL IAHLRSMVGT 300 PLMPGKSVDT YIFALYDENL KPGPSSERAF GLFKTDLSMA YDVGLAKSSG SSSGNSSSQT 360 PSGKVTSTGW CVPKKGATDE QLQASLDWAC GQGIDCGPIQ PGGACFEPNN VASHAAFAMN 420 MYFQKSPKNP ADCDFSQTAT ITSQNPSYNS CVYPGGGAGS VGVMNKYVNS DKLERKTNGA 480 VEPKVSFSLS FLLIFMFLIL HVDM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-8 | 98 | 336 | 243 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-23 | 370 | 440 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-42 | 370 | 453 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-93 | 26 | 343 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD22313.1 | 0 | 20 | 447 | 19 | 443 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | ABK95331.1 | 0 | 3 | 458 | 1 | 456 | unknown [Populus trichocarpa] |
RefSeq | NP_179219.4 | 0 | 20 | 500 | 19 | 497 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_195174.6 | 0 | 1 | 485 | 1 | 485 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002509479.1 | 0 | 20 | 456 | 22 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 343 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |