| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10024989m |
| Family | GH14 |
| Protein Properties | Length: 499 Molecular Weight: 56076.5 Isoelectric Point: 5.0077 |
| Chromosome | Chromosome/Scaffold: 1 Start: 12203973 End: 12206342 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 17 | 437 | 0 |
| YVMLPLGVVNVENVFADQETLETQLKRLKEEAGIDGVMVDVWWGIIESKGPKQYDWTAYKTLFQLIARLGLKIQAIMSFHQCGGNVGDVVTIPIPKWVRD VGDSDPDIFYTNRKGTRDVEYLSIGVDNLPLFAGRTAVQMYSDYMSSFKENMADLLETGAIVDIEVGLGPAGELRYPSYPQSQGWVFPGIGEFQCYDKYL KKDFKEAAAKAGHPEWELPEDAGEYNDKPEQTGFFRSDGTYVSEKGKFFLTWYSNKLIFHGDQILGEANKIFAGLKVNLAAKVSGIHWLYNHHSHAAELT AGYYNLFERDGYRPMARMLSKHYGILNFTCLEMKDTDNVAEALSAPQELVQDVLSKAWKEGIEVAGENALETYGAKGYNQILLNARPNGVNPNGKPKLRM YGFTYLRLSDTVFQENNFELF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 499 Download |
| MAANDNDKLL LNYVPVYVML PLGVVNVENV FADQETLETQ LKRLKEEAGI DGVMVDVWWG 60 IIESKGPKQY DWTAYKTLFQ LIARLGLKIQ AIMSFHQCGG NVGDVVTIPI PKWVRDVGDS 120 DPDIFYTNRK GTRDVEYLSI GVDNLPLFAG RTAVQMYSDY MSSFKENMAD LLETGAIVDI 180 EVGLGPAGEL RYPSYPQSQG WVFPGIGEFQ CYDKYLKKDF KEAAAKAGHP EWELPEDAGE 240 YNDKPEQTGF FRSDGTYVSE KGKFFLTWYS NKLIFHGDQI LGEANKIFAG LKVNLAAKVS 300 GIHWLYNHHS HAAELTAGYY NLFERDGYRP MARMLSKHYG ILNFTCLEMK DTDNVAEALS 360 APQELVQDVL SKAWKEGIEV AGENALETYG AKGYNQILLN ARPNGVNPNG KPKLRMYGFT 420 YLRLSDTVFQ ENNFELFKKL VRKMHADQDY CGDAGKYGHE MKPLKTQYSQ LTVEDIADAA 480 KPSGAFKWDS ETDMKVDG* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 1.0e-127 | 2 | 447 | 449 | + beta-amylase | ||
| PLN00197 | PLN00197 | 7.0e-162 | 14 | 449 | 440 | + beta-amylase; Provisional | ||
| PLN02905 | PLN02905 | 1.0e-162 | 13 | 447 | 439 | + beta-amylase | ||
| PLN02803 | PLN02803 | 3.0e-178 | 14 | 444 | 434 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 498 | 498 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA07842.1 | 0 | 1 | 498 | 1 | 498 | beta-amylase [Arabidopsis thaliana] |
| DDBJ | BAH20736.1 | 0 | 1 | 498 | 1 | 498 | beta-amylase [Raphanus sativus] |
| EMBL | CAB10300.1 | 0 | 1 | 498 | 1 | 499 | beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_567460.1 | 0 | 1 | 498 | 1 | 498 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| RefSeq | NP_849389.1 | 0 | 1 | 410 | 1 | 410 | BAM5 (BETA-AMYLASE 5); beta-amylase [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uko_D | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_B | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_A | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1wdp_A | 0 | 3 | 498 | 1 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO777976 | 493 | 8 | 499 | 0 |
| HO803971 | 396 | 93 | 488 | 0 |
| EG522849 | 281 | 213 | 493 | 0 |
| HO782669 | 385 | 110 | 494 | 0 |
| CK121669 | 247 | 114 | 360 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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