y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10025047m |
Family | CBM43 |
Protein Properties | Length: 486 Molecular Weight: 52969.4 Isoelectric Point: 5.7373 |
Chromosome | Chromosome/Scaffold: 1 Start: 3733651 End: 3735630 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 365 | 447 | 1.8e-24 |
WCILAPSANLQDPQLGPSVSYACDHADCTSLGYGSSCGNLNLAQNVSYAFNSYYQVSDQLDSACKFPGLSVISARDPSVGSCK | |||
GH17 | 27 | 345 | 0 |
IGVNWGSQASHPLPPATVVRLLRENGIQKVKLFEADTKILRALSRSGIQVMVGIPNDLLAPLAGSVAAAERWVSQNVSAHVSSNGVDIRYVAVGNEPFLK AFNKTFESITLPALQNIQSALIKAGLATQVKVTVPLNADVYQSASNLPSDGDFRPDIRDLMIEIVKFLSDNQAPFTINIYPFISLYEDPNFPVEFAFFDG TGTPINDNGRIYDNVLDANYDTLAWSLQKNGFGNLSIIVGEVGWPTDGDKNANMQYARRYNQGFMNRQKAGKGTPMRPGPMDAYLFSLIDEDAKSIQPGN FERHWGIFYIDGQPKYQLS |
Full Sequence |
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Protein Sequence Length: 486 Download |
MLSKSVFTVS FVIILLYGSL SFEVEGIGVN WGSQASHPLP PATVVRLLRE NGIQKVKLFE 60 ADTKILRALS RSGIQVMVGI PNDLLAPLAG SVAAAERWVS QNVSAHVSSN GVDIRYVAVG 120 NEPFLKAFNK TFESITLPAL QNIQSALIKA GLATQVKVTV PLNADVYQSA SNLPSDGDFR 180 PDIRDLMIEI VKFLSDNQAP FTINIYPFIS LYEDPNFPVE FAFFDGTGTP INDNGRIYDN 240 VLDANYDTLA WSLQKNGFGN LSIIVGEVGW PTDGDKNANM QYARRYNQGF MNRQKAGKGT 300 PMRPGPMDAY LFSLIDEDAK SIQPGNFERH WGIFYIDGQP KYQLSLGNGN GLIPAKDVQH 360 MAKKWCILAP SANLQDPQLG PSVSYACDHA DCTSLGYGSS CGNLNLAQNV SYAFNSYYQV 420 SDQLDSACKF PGLSVISARD PSVGSCKFKI MIKSDSSDCE ASARMPLTRS MAVLLLISMC 480 LYIVL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0007 | 259 | 337 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-14 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-28 | 364 | 448 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-76 | 27 | 345 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_194843.1 | 0 | 1 | 485 | 1 | 484 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002324127.1 | 0 | 23 | 456 | 37 | 474 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330836.1 | 0 | 23 | 483 | 34 | 498 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528007.1 | 0 | 21 | 457 | 23 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002530371.1 | 0 | 8 | 453 | 5 | 451 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 27 | 346 | 1 | 306 | A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of Human Galectin-8 |
PDB | 1aq0_B | 0 | 27 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 27 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 2cyg_A | 0 | 27 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 27 | 346 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |