| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10025081m |
| Family | CBM43 |
| Protein Properties | Length: 480 Molecular Weight: 53623.1 Isoelectric Point: 8.4311 |
| Chromosome | Chromosome/Scaffold: 1 Start: 15170088 End: 15171922 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 390 | 473 | 4.8e-25 |
| WCVPVEGANETELEEALRLACGQSNTTCAALAPGRECYEPVSIYWHASYAVSSYWAQFRTQDVRCYFNGLAHETTINPGNDRCK | |||
| GH17 | 43 | 364 | 0 |
| IGINYGRQGNNLPSPYQSINFIKSIKAGHVKLYDADPESLTLLSHTNLYVTITVPNHQIISLGSNQTTAEDWVKTNILPYYPQTQIRFVLVGNEILSAEN RNITANLVPAMRKIVTSLRAHGIHNIKVGTPLAMDSLRSTFPPSNSTFREDIAGELMLPLMKFLNGTNSYFFINLQPYFRWSRNPMNTSLDFALFQGNST YTDPHTGLVYHNLLDQMLDSVIYAMTKLGYPHIRIAISETGWPNFGDIDETGANILNAATYNRNLIKKMTANPPIGTPARPGLPIPTFVFSLFNENQKSG SGTQRHWGLLHPDGTPIYDIDF | |||
| Full Sequence |
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| Protein Sequence Length: 480 Download |
| MALLAFFLFT ILVFSSSCSS ATRFHYPHRY MQRKAMLDLA SKIGINYGRQ GNNLPSPYQS 60 INFIKSIKAG HVKLYDADPE SLTLLSHTNL YVTITVPNHQ IISLGSNQTT AEDWVKTNIL 120 PYYPQTQIRF VLVGNEILSA ENRNITANLV PAMRKIVTSL RAHGIHNIKV GTPLAMDSLR 180 STFPPSNSTF REDIAGELML PLMKFLNGTN SYFFINLQPY FRWSRNPMNT SLDFALFQGN 240 STYTDPHTGL VYHNLLDQML DSVIYAMTKL GYPHIRIAIS ETGWPNFGDI DETGANILNA 300 ATYNRNLIKK MTANPPIGTP ARPGLPIPTF VFSLFNENQK SGSGTQRHWG LLHPDGTPIY 360 DIDFTGQKPL TGFNPLPKPT NNVPYKGQVW CVPVEGANET ELEEALRLAC GQSNTTCAAL 420 APGRECYEPV SIYWHASYAV SSYWAQFRTQ DVRCYFNGLA HETTINPGND RCKFPSVTL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-12 | 390 | 461 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-28 | 390 | 474 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-136 | 43 | 364 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 15 | 479 | 15 | 476 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| DDBJ | BAG16359.1 | 0 | 54 | 452 | 1 | 399 | tapetum-specific protein A6 family protein [Brassica oleracea var. italica] |
| DDBJ | BAG16366.1 | 0 | 54 | 452 | 1 | 399 | tapetum-specific protein A6 family protein [Brassica rapa var. perviridis] |
| EMBL | CAA49513.1 | 0 | 6 | 479 | 1 | 474 | beta-1,3-glucanase homologue [Brassica napus] |
| RefSeq | NP_193144.1 | 0 | 1 | 479 | 1 | 478 | MEE48 (maternal effect embryo arrest 48); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 43 | 364 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 43 | 364 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 43 | 364 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 43 | 364 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 43 | 364 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
