| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10025261m |
| Family | GH5 |
| Protein Properties | Length: 432 Molecular Weight: 49906.8 Isoelectric Point: 8.2131 |
| Chromosome | Chromosome/Scaffold: 1 Start: 5088787 End: 5091495 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 52 | 378 | 1.2e-33 |
| DGKALYVNGWNSYWFMDHAVNEHSRYRVSEMLEAGAKMGLTVCRTWAFNDGGYNALQISPGHFDERVFQALDHVIAEARKHDVRLLLSLVNNLQAYGGKS QYVKWAWQEGVGLSSSNDSFFFDPSIRKYFKNYLTALLTRKNSVTGIEYRNDPTIFAWELINEPRCSSDVSGDTLQEWIDEMTGFIKSIDDKHLLTVGLE GFYGPKSPKRLTVNPEQWPSELGTDFVRNSNSSNIDFASVHIYPDHWFHDQSFEDKLKFVVKWMQSHVEDGMKELKKPVLFTEFGLSNLNKDYEPSQRER FYRIIFDVVYKSAKRRKSGAGTLVWQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 432 Download |
| MAPARNGAVL PILGFLICAA FIYFSFRDLW LYHKAKTELG FVKRNGTQFV VDGKALYVNG 60 WNSYWFMDHA VNEHSRYRVS EMLEAGAKMG LTVCRTWAFN DGGYNALQIS PGHFDERVFQ 120 ALDHVIAEAR KHDVRLLLSL VNNLQAYGGK SQYVKWAWQE GVGLSSSNDS FFFDPSIRKY 180 FKNYLTALLT RKNSVTGIEY RNDPTIFAWE LINEPRCSSD VSGDTLQEWI DEMTGFIKSI 240 DDKHLLTVGL EGFYGPKSPK RLTVNPEQWP SELGTDFVRN SNSSNIDFAS VHIYPDHWFH 300 DQSFEDKLKF VVKWMQSHVE DGMKELKKPV LFTEFGLSNL NKDYEPSQRE RFYRIIFDVV 360 YKSAKRRKSG AGTLVWQLFM EGMEGFNDEF GIVPHEQDSM YRLMIEQSCR LGRVTGRLKE 420 HKLKKLCSHR H* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam12876 | Cellulase-like | 0.002 | 199 | 294 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. |
| COG2730 | BglC | 0.0007 | 17 | 351 | 372 | + Endoglucanase [Carbohydrate transport and metabolism] |
| pfam00150 | Cellulase | 2.0e-7 | 177 | 348 | 173 | + Cellulase (glycosyl hydrolase family 5). |
| COG3934 | COG3934 | 1.0e-26 | 63 | 396 | 342 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD20927.1 | 0 | 2 | 430 | 3 | 402 | (1-4)-beta-mannan endohydrolase [Arabidopsis thaliana] |
| GenBank | ABK95966.1 | 0 | 4 | 431 | 6 | 435 | unknown [Populus trichocarpa] |
| RefSeq | NP_179660.2 | 0 | 2 | 430 | 3 | 432 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | NP_194561.1 | 0 | 1 | 431 | 1 | 431 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330687.1 | 0 | 4 | 431 | 6 | 435 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 41 | 415 | 6 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 40 | 394 | 13 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 40 | 394 | 13 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 40 | 394 | 13 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 40 | 394 | 13 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
