y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10025369m |
Family | GH17 |
Protein Properties | Length: 401 Molecular Weight: 44505.1 Isoelectric Point: 8.1242 |
Chromosome | Chromosome/Scaffold: 1 Start: 9516155 End: 9518093 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 352 | 0 |
LGINYGQVGNDLPSPDKVINLLRSLRITKTRIYDTNPQILSSFANSNIEIIVTIENQVLPLLQDPQQALQWVDSHIKPYIPATRITGIMVGNELFTDEDS SLIGYMMPAMINIHKALVQLGLDRYIQVSSPCSLAVLAESYPPSAGSFKPAVSSVMQQLLDFLEATKSPFWINAYPYFAYKDSPNKIPIDYVLFNRNIGM TDPNTRLHYDNMMYAQVDAVAFAAAKLGYRNIEVRVAETGWPSKGDPGEIGASPLNAATYNRNLMMRQFAGEGTPARRNSRLDVYIFALFNEDMKPGPTS EKNYGIFRPDGSLAYNLGF |
Full Sequence |
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Protein Sequence Length: 401 Download |
MTSRTCTRLS NLFNVFLLLS LVFSGNILQR VTSLGINYGQ VGNDLPSPDK VINLLRSLRI 60 TKTRIYDTNP QILSSFANSN IEIIVTIENQ VLPLLQDPQQ ALQWVDSHIK PYIPATRITG 120 IMVGNELFTD EDSSLIGYMM PAMINIHKAL VQLGLDRYIQ VSSPCSLAVL AESYPPSAGS 180 FKPAVSSVMQ QLLDFLEATK SPFWINAYPY FAYKDSPNKI PIDYVLFNRN IGMTDPNTRL 240 HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDP GEIGASPLNA ATYNRNLMMR 300 QFAGEGTPAR RNSRLDVYIF ALFNEDMKPG PTSEKNYGIF RPDGSLAYNL GFSTMSTTTA 360 NSESVTYSSS ATKAVNKATS LEYWTILILA MIQVVMLRLF * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-6 | 263 | 343 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 9.0e-84 | 34 | 352 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG52058.1 | 0 | 9 | 358 | 1 | 360 | AC022455_12 beta-1,3-glucanase precursor, putative; 75043-73120 [Arabidopsis thaliana] |
EMBL | CAA16806.1 | 0 | 1 | 373 | 1 | 373 | beta-1, 3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_174300.2 | 0 | 9 | 398 | 1 | 406 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_193568.2 | 0 | 1 | 400 | 1 | 397 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002332000.1 | 0 | 12 | 373 | 10 | 373 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 34 | 353 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 34 | 353 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 34 | 353 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 34 | 353 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |