y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10025388m |
Family | GT77 |
Protein Properties | Length: 398 Molecular Weight: 45383 Isoelectric Point: 8.3102 |
Chromosome | Chromosome/Scaffold: 1 Start: 14296421 End: 14297634 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 145 | 342 | 0 |
LNHLVIIALDAKAYSRCRELHKHCFSLETEGVDFSGEAYFMTRSYLKMMWRRIDFLRSVLEMGYNFVFTDADVMWFRNPFPRFYRSADFQIACDHYLGRS NDLQNRPNGGFSFVRSNNRTVLFYKYWYASRIRYAGYHDQDVLNFIKTEPFLSQIGLKIRFLNTAYFGGLCEPSKDLNLVRTMHANCCFGMDSKLHDL |
Full Sequence |
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Protein Sequence Length: 398 Download |
MNLSNRVGSR FKTARLNVSS RVGNLSSVSA AASVVMPPCS GPLRRVVVFL VAISISCFVL 60 YRSAESLHVV PGSSSSIISR IFPSLDSFKS LEIEEPKLED VLRRAATRDG TVILTTLNEA 120 WAAPGSVIDL FFESFGIGEG TSMLLNHLVI IALDAKAYSR CRELHKHCFS LETEGVDFSG 180 EAYFMTRSYL KMMWRRIDFL RSVLEMGYNF VFTDADVMWF RNPFPRFYRS ADFQIACDHY 240 LGRSNDLQNR PNGGFSFVRS NNRTVLFYKY WYASRIRYAG YHDQDVLNFI KTEPFLSQIG 300 LKIRFLNTAY FGGLCEPSKD LNLVRTMHAN CCFGMDSKLH DLRIMLQDWR DFLPLHLKQS 360 SGFSWKVPQN CSLASLRRYD SMDEDESEPP GDSFFFF* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 4.0e-77 | 144 | 342 | 208 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD20098.1 | 0 | 1 | 383 | 219 | 614 | unknown protein [Arabidopsis thaliana] |
GenBank | AAT70491.1 | 0 | 37 | 393 | 3 | 352 | At1g14590 [Arabidopsis thaliana] |
GenBank | ACQ90601.1 | 0 | 1 | 393 | 1 | 395 | putative Myb DNA binding protein [Thellungiella halophila] |
RefSeq | NP_001118253.1 | 0 | 1 | 383 | 1 | 396 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_172911.1 | 0 | 1 | 393 | 1 | 384 | unknown protein [Arabidopsis thaliana] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR462686 | 257 | 128 | 381 | 0 |
EE542542 | 224 | 151 | 371 | 0 |
EV573487 | 217 | 168 | 381 | 0 |
EV568852 | 213 | 92 | 303 | 0 |
EV568852 | 51 | 295 | 345 | 3e-17 |
Sequence Alignments (This image is cropped. Click for full image.) |
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