Basic Information | |
---|---|
Species | Thellungiella halophila |
Cazyme ID | Thhalv10025491m |
Family | GT77 |
Protein Properties | Length: 375 Molecular Weight: 42718 Isoelectric Point: 8.6432 |
Chromosome | Chromosome/Scaffold: 1 Start: 8592849 End: 8595363 |
Description | |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT77 | 146 | 343 | 0 |
LKHVIAVCLDNKAYDRCVEVHPHCYLINATDSDQLSGPNRFMTPGYLKLIWRRMDLHRQVLGLGYNFIFTDADILWLRDPFPRFFPDADFQITCDDYNGK PSDKNNHVNSGFTYVKANNKTLNFYKYWIRSSRKFPGKHDQDVFNLIKNKHFIEKLGIKMRFFDTVYFGGFCQPSRDINVVNTMHANCCIGLDNKVNN |
Full Sequence |
---|
Protein Sequence Length: 375 Download |
MKSTNGESSS LGYKFAGVNM DDGKSKPPVI YSDGFFGGRD VIKVVLLVAT VTLSCLLFYK 60 SANNPLNMVS PWKSDCYSSK IINETSLEMV QKKKPVSELE RVLMNAAMED NTVIITALNQ 120 AWAEPNSTFD VFRESFKAGL GTERLLKHVI AVCLDNKAYD RCVEVHPHCY LINATDSDQL 180 SGPNRFMTPG YLKLIWRRMD LHRQVLGLGY NFIFTDADIL WLRDPFPRFF PDADFQITCD 240 DYNGKPSDKN NHVNSGFTYV KANNKTLNFY KYWIRSSRKF PGKHDQDVFN LIKNKHFIEK 300 LGIKMRFFDT VYFGGFCQPS RDINVVNTMH ANCCIGLDNK VNNLKAALED WKLYVSLNTT 360 VSETKWNIPP RCGY* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 3.0e-65 | 145 | 344 | 208 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61239.1 | 0 | 34 | 372 | 22 | 364 | regulatory protein [Arabidopsis thaliana] |
RefSeq | NP_193730.1 | 0 | 1 | 370 | 1 | 373 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_193730.1 | 0 | 27 | 372 | 372 | 714 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_199295.2 | 0 | 34 | 372 | 22 | 364 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002315829.1 | 0 | 27 | 373 | 31 | 384 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GT085346 | 312 | 2 | 313 | 0 |
GT084925 | 299 | 2 | 300 | 0 |
GT085136 | 284 | 19 | 302 | 0 |
ES929738 | 204 | 55 | 258 | 0 |
BY815549 | 160 | 1 | 160 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|