Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10026924m |
Family | CE8 |
Protein Properties | Length: 371 Molecular Weight: 40946.9 Isoelectric Point: 5.9611 |
Chromosome | Chromosome/Scaffold: 1 Start: 4322133 End: 4323733 |
Description | methylesterase PCR A |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 56 | 355 | 0 |
DVIVAKDGTGKFKTVKEAVAAAPENSKTRYVIYVKLGIYDEVVNITKEKTNLTIVGDGRDSTVLTGSLNAKDGYTTLASATLAVDAIGFLAQDLCIRNTA GPAKGQAVALRVSADLVVIHRCRIEAFQDTLYAYKYRQYYRECYITGTVDFICGDATAVFQYCQIEARNPHGGLVNVITAQSWNNMTEESTGFVIQKCNI TATQDLLPIKRKVKTYLGRPWGILSRVVIMESFIDDLIAPEGYTPMNSSDVKRLSTLFYREYKNTGPGADTSKRVKWKGFKVITDPKEVEMFTVGEFIQG |
Full Sequence |
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Protein Sequence Length: 371 Download |
FSSCLVISFT DQEGEIVLPS STSMLKMVVD DFPTWLSDVD KKLLLDSTSE LKKNADVIVA 60 KDGTGKFKTV KEAVAAAPEN SKTRYVIYVK LGIYDEVVNI TKEKTNLTIV GDGRDSTVLT 120 GSLNAKDGYT TLASATLAVD AIGFLAQDLC IRNTAGPAKG QAVALRVSAD LVVIHRCRIE 180 AFQDTLYAYK YRQYYRECYI TGTVDFICGD ATAVFQYCQI EARNPHGGLV NVITAQSWNN 240 MTEESTGFVI QKCNITATQD LLPIKRKVKT YLGRPWGILS RVVIMESFID DLIAPEGYTP 300 MNSSDVKRLS TLFYREYKNT GPGADTSKRV KWKGFKVITD PKEVEMFTVG EFIQGDLWIN 360 STGVPYDVGL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 8.0e-122 | 30 | 370 | 341 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 8.0e-123 | 30 | 370 | 341 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02488 | PLN02488 | 2.0e-154 | 19 | 370 | 352 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-159 | 17 | 370 | 354 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 4.0e-167 | 56 | 356 | 301 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK28620.1 | 0 | 17 | 370 | 176 | 524 | unknown [Arabidopsis thaliana] |
RefSeq | NP_172624.1 | 0 | 17 | 366 | 207 | 553 | PMEPCRA (METHYLESTERASE PCR A); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_172625.3 | 0 | 17 | 370 | 176 | 524 | pectin methylesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_192302.3 | 0 | 17 | 370 | 176 | 524 | enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Swiss-Prot | Q1JPL7 | 0 | 17 | 366 | 207 | 553 | PME18_ARATH RecName: Full=Pectinesterase/pectinesterase inhibitor 18; AltName: Full=AtPMEpcrA; Contains: RecName: Full=Pectinesterase inhibitor 18; AltName: Full=Pectin methylesterase inhibitor 18; Contains: RecName: Full=Bifunctional pectinesterase 18/rRNA N-glycosylase; Short=PE 18; AltName: Full=Ribosome-inactivating protein; AltName: Full=Pectin methylesterase 18; AltName: Full=Pectin methylesterase 4; Short=AtPME4; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 55 | 370 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 56 | 370 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 9e-27 | 56 | 328 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 9e-27 | 56 | 328 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 9e-27 | 56 | 328 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777316 | 341 | 31 | 371 | 0 |
JG606995 | 307 | 65 | 371 | 0 |
EB452110 | 282 | 59 | 340 | 0 |
DV711860 | 317 | 33 | 349 | 0 |
GO241839 | 299 | 65 | 363 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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