| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10027468m |
| Family | CBM22 |
| Protein Properties | Length: 569 Molecular Weight: 63732.4 Isoelectric Point: 6.884 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2626290 End: 2628358 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| CBM22 | 47 | 162 | 4.5e-21 |
| IIVNSDLQNGSQGWSQFGNAKVDFREFGGNKFAVAGERNKSYDSVSQKVYLEKGLFYTFSAWLQVTKGKAPVTAVFKKNGEYKHAGSVISESKCWSMLKG GLTVDESGPSELYFES | |||
| GH10 | 221 | 481 | 0 |
| QNRLGFPFGCAVEKNILGNQAYQNWFTKRFTVTTFGNEMKWYSTERVRGKEDYSTADAMLRFFKQHGVAVRGHNILWEDPKYQPRWVSSLSGKDLYNAVK RRVFSVVSRYKGQLAGWDVVNENLHFSFFESKMGPKASYNTYAEAHIIDPRTTMFMNEFNTLEQPGDSASSPARYLQKLRELQSIRVSGSIPLGIGLESH FSTPNIPYMRSALDTLAATGLPIWLTEVDVDAPPNVRAKYFEQVLREGHAHPQVKGMVTWT | |||
| Full Sequence |
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| Protein Sequence Length: 569 Download |
| MKTFAGCEEN FVPYDYSATI EASDSLFIQT CSSEISNPYK PQYNGGIIVN SDLQNGSQGW 60 SQFGNAKVDF REFGGNKFAV AGERNKSYDS VSQKVYLEKG LFYTFSAWLQ VTKGKAPVTA 120 VFKKNGEYKH AGSVISESKC WSMLKGGLTV DESGPSELYF ESEDTTVEIW VDSVSLQPFT 180 QEEWNSHHEQ SIHKARKGTV RIRAVNSGGE PLPNATISIV QNRLGFPFGC AVEKNILGNQ 240 AYQNWFTKRF TVTTFGNEMK WYSTERVRGK EDYSTADAML RFFKQHGVAV RGHNILWEDP 300 KYQPRWVSSL SGKDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHFSFFE SKMGPKASYN 360 TYAEAHIIDP RTTMFMNEFN TLEQPGDSAS SPARYLQKLR ELQSIRVSGS IPLGIGLESH 420 FSTPNIPYMR SALDTLAATG LPIWLTEVDV DAPPNVRAKY FEQVLREGHA HPQVKGMVTW 480 TGYSPTGCYR MCLTDGNFRN LPTGDVVDKL LREWGGLRGQ TTGLTDADGF FEASLFHGDY 540 DLNIAHPLAN SSASHSFKLT SEDSQPSPF |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 6.0e-31 | 248 | 450 | 214 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-49 | 226 | 480 | 274 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-80 | 259 | 507 | 273 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA19866.1 | 0 | 29 | 568 | 124 | 662 | putative protein [Arabidopsis thaliana] |
| EMBL | CAA19866.1 | 0 | 399 | 506 | 2 | 109 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_195109.2 | 0 | 3 | 569 | 15 | 572 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | NP_195110.3 | 0 | 7 | 568 | 18 | 569 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| RefSeq | NP_195112.2 | 0 | 7 | 569 | 18 | 572 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 2e-28 | 228 | 507 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1tux_A | 2e-25 | 228 | 511 | 18 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1x_A | 2e-25 | 219 | 513 | 9 | 303 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 1i1w_A | 2e-25 | 219 | 513 | 9 | 303 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 4e-25 | 219 | 513 | 9 | 303 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DR353177 | 217 | 76 | 292 | 0 |
| EX266128 | 285 | 241 | 520 | 0 |
| GR454025 | 253 | 3 | 255 | 0 |
| ES938997 | 194 | 35 | 228 | 0 |
| EX266128 | 41 | 523 | 559 | 0.032 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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