| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10028514m |
| Family | CBM49 |
| Protein Properties | Length: 628 Molecular Weight: 69526.4 Isoelectric Point: 9.4545 |
| Chromosome | Chromosome/Scaffold: 3 Start: 5051082 End: 5054586 |
| Description | glycosyl hydrolase 9C3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM49 | 535 | 612 | 1.1e-37 |
| ITISQKMTNSWVNERKVYYRYSTRLTNRSTKTLKNLKISITKLYGPIWGVAKTGNSFGFPSWMQSLPAGQSMEFVYIH | |||
| GH9 | 27 | 488 | 0 |
| DYKQALSKSILFFEAQRSGHLPPNQRVSWRSHSGLNDGKSSGVDLVGGYYDAGDNVKFGLPMAFTVTTMCWSIIEYGGQLESNGELGNAIDAVKWGTDYF IKAHPEPNVLYGEVGDGKSDHYCWQRPEEMTTDRRAYKIDRNNPGSDLAGETAAAMTAASIVFRRSDPSYSAELLRHAHQLFEFADKYRGKYDSSITVAQ KYYRSVSGYNDELLWAAVWLYQATNDKYYLDYLGKNGDSMGGTGWSMTEFGWDVKYAGVQTLVAKVLMQGKAGEHTAVFERYQQKAEQYMCSLLGKSTKN IQKTPGGLIFRQRWNNMQFVTSASFLASVYSDYLSSSKRNLRCSQGNISPSQLLDFSKSQVDYILGDNPRATSYMVGYGQNYPRQVHHRGSSIVSFKVDQ KFVTCRGGYATWYSRKGSDPNVLTGALVGGPDAYDNFADQRDNYEQTEPATYNNAPLLGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 628 Download |
| MGSKSTISIL LLLLLLGLAQ FAVSGHDYKQ ALSKSILFFE AQRSGHLPPN QRVSWRSHSG 60 LNDGKSSGVD LVGGYYDAGD NVKFGLPMAF TVTTMCWSII EYGGQLESNG ELGNAIDAVK 120 WGTDYFIKAH PEPNVLYGEV GDGKSDHYCW QRPEEMTTDR RAYKIDRNNP GSDLAGETAA 180 AMTAASIVFR RSDPSYSAEL LRHAHQLFEF ADKYRGKYDS SITVAQKYYR SVSGYNDELL 240 WAAVWLYQAT NDKYYLDYLG KNGDSMGGTG WSMTEFGWDV KYAGVQTLVA KVLMQGKAGE 300 HTAVFERYQQ KAEQYMCSLL GKSTKNIQKT PGGLIFRQRW NNMQFVTSAS FLASVYSDYL 360 SSSKRNLRCS QGNISPSQLL DFSKSQVDYI LGDNPRATSY MVGYGQNYPR QVHHRGSSIV 420 SFKVDQKFVT CRGGYATWYS RKGSDPNVLT GALVGGPDAY DNFADQRDNY EQTEPATYNN 480 APLLGVLARL ISGSTGFDQL LPGVSPTPSP VIIKPAPVPK RKPTTPPAAS SPSPITISQK 540 MTNSWVNERK VYYRYSTRLT NRSTKTLKNL KISITKLYGP IWGVAKTGNS FGFPSWMQSL 600 PAGQSMEFVY IHSASPANIL VSKYSLE* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 0 | 21 | 627 | 607 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 19 | 624 | 609 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 5 | 491 | 489 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 6 | 490 | 485 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 27 | 488 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC35539.1 | 0 | 1 | 627 | 1 | 625 | contains similarity to glycosyl hydrolases family 9 (Pfam: glycosyl_hydro5.hmm, score: 88.03) [Arabidopsis thaliana] |
| GenBank | AAN31840.1 | 0 | 22 | 626 | 20 | 619 | putative endo-beta-1,4-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_176621.1 | 0 | 22 | 626 | 20 | 619 | AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_192843.2 | 0 | 1 | 627 | 1 | 626 | AtGH9C3 (Arabidopsis thaliana glycosyl hydrolase 9C3); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002303645.1 | 0 | 24 | 626 | 24 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 26 | 492 | 3 | 430 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1ksc_A | 0 | 26 | 492 | 3 | 430 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
| PDB | 1ks8_A | 0 | 26 | 492 | 3 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 22 | 490 | 20 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 27 | 514 | 5 | 466 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
