Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10029156m |
Family | CBM43 |
Protein Properties | Length: 148 Molecular Weight: 16439.7 Isoelectric Point: 9.0169 |
Chromosome | Chromosome/Scaffold: 3 Start: 1900192 End: 1901093 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 27 | 110 | 9e-34 |
WCVARPSASQAELQRALDWACGIGRVDCSVIERRGDCYEPDTIVSHASFAFNAYYQSNGNNLIACYFGGTATLTKINPSYGKCS |
Full Sequence |
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Protein Sequence Length: 148 Download |
TRPVITIRPE SPVRPQGNTT FLDGTTWCVA RPSASQAELQ RALDWACGIG RVDCSVIERR 60 GDCYEPDTIV SHASFAFNAY YQSNGNNLIA CYFGGTATLT KINPSYGKCS YDVSKSEVAA 120 ARSLSQYKPR WLRLMYIGVL LFLWRRS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-22 | 26 | 98 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-41 | 26 | 111 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ85566.1 | 0 | 4 | 142 | 34 | 173 | unknown [Medicago truncatula] |
GenBank | ACU17215.1 | 0 | 3 | 121 | 35 | 148 | unknown [Glycine max] |
EMBL | CAB81085.1 | 0 | 5 | 116 | 1 | 112 | putative protein [Arabidopsis thaliana] |
EMBL | CBI30973.1 | 0 | 3 | 131 | 583 | 706 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_192452.2 | 0 | 5 | 146 | 1 | 142 | unknown protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-20 | 26 | 111 | 12 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CF652466 | 104 | 2 | 105 | 0 |
DT019806 | 129 | 3 | 131 | 0 |
DT039619 | 129 | 3 | 131 | 0 |
CF652466 | 34 | 115 | 148 | 0.0003 |
CF652466 | 12 | 106 | 117 | 0.0003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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