| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20000138m |
| Family | GT49 |
| Protein Properties | Length: 544 Molecular Weight: 60377.2 Isoelectric Point: 8.7434 |
| Chromosome | Chromosome/Scaffold: 18 Start: 2300462 End: 2306700 |
| Description | |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT49 | 222 | 464 | 9.52883e-44 |
| RVQVLRANHSSSSSLSPVCDLRLMLFAERVSDLQLAAIMPTNVLRNAAALAAQTDLVAMLDADLGVSATFNMLVSDVDRLRNLFQEAAERPALYVVPAFE PNPLMEMETANGVSDAALSGSKADLIALWSNSTVKVFHVDGCRQCHKQINHMVWARSNESYEVHFARNFEPWGILPRFKDPGYDERFRGWAFDKIQHVES LALFKDFRFVILPDVWIIHRPHPKVAIARIHAQHQQTRNSKEQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 544 Download |
| MAVPSRRKLL LFLCGWCWCW AAVAIQNEPV DQLGPFRGSS NLNAGEQLRT CWNALYDPAP 60 VGYTDWLAGG PARLYLVDVW WPARPSNLPM TVFTMASMDR LHLLEAQCRG YKGPLSAAIY 120 LPLPTTGAMS PVAAVKGDDA GDGEAPLAVT LRPARANVKG GDVMVDRKGV GKAAAKGRGT 180 NGLADRRSLL GTDDTAIDKL MLRQHGAQLS AAREKIQAFF DRVQVLRANH SSSSSLSPVC 240 DLRLMLFAER VSDLQLAAIM PTNVLRNAAA LAAQTDLVAM LDADLGVSAT FNMLVSDVDR 300 LRNLFQEAAE RPALYVVPAF EPNPLMEMET ANGVSDAALS GSKADLIALW SNSTVKVFHV 360 DGCRQCHKQI NHMVWARSNE SYEVHFARNF EPWGILPRFK DPGYDERFRG WAFDKIQHVE 420 SLALFKDFRF VILPDVWIIH RPHPKVAIAR IHAQHQQTRN SKEQQEEGKS NDQVNVLLEQ 480 ELSLKDGRTG TAYKFYMSYV HSLIRAERSV LEGSNRAKYG PQLNPQLLYC KSKLPWWQSP 540 TLK* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13896 | Glyco_transf_49 | 0.0009 | 89 | 124 | 36 | + Glycosyl-transferase for dystroglycan. This glycosyl-transferase brings about the glycosylation of the alpha-dystroglycan subunit. Dystroglycan is an integral member of the skeletal muscular dystrophin glycoprotein complex, which links dystrophin to proteins in the extracellular matrix. | ||
| pfam13896 | Glyco_transf_49 | 3.0e-32 | 253 | 459 | 216 | + Glycosyl-transferase for dystroglycan. This glycosyl-transferase brings about the glycosylation of the alpha-dystroglycan subunit. Dystroglycan is an integral member of the skeletal muscular dystrophin glycoprotein complex, which links dystrophin to proteins in the extracellular matrix. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH03159.1 | 0.000000007 | 67 | 123 | 1 | 58 | InvC [Volvox carteri f. nagariensis] |
| DDBJ | BAH03159.1 | 4e-39 | 211 | 537 | 77 | 378 | InvC [Volvox carteri f. nagariensis] |
| RefSeq | XP_001695887.1 | 7e-36 | 240 | 410 | 17 | 164 | hypothetical protein CHLREDRAFT_149054 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001696547.1 | 0.0000002 | 72 | 123 | 13 | 65 | hypothetical protein CHLREDRAFT_187123 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001696547.1 | 2e-31 | 191 | 539 | 55 | 397 | hypothetical protein CHLREDRAFT_187123 [Chlamydomonas reinhardtii] |
| Signal Peptide | ||||
|---|---|---|---|---|
| Cleavage Site | ||||
| 24 | ||||
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FD828047 | 226 | 284 | 504 | 2e-20 |
| FD804992 | 177 | 211 | 387 | 6e-16 |
| GE144920 | 192 | 258 | 447 | 9e-16 |
| GE262039 | 172 | 240 | 411 | 0.00000000000001 |
| FD804992 | 66 | 59 | 123 | 0.0000000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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