| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20000377m |
| Family | GH10 |
| Protein Properties | Length: 796 Molecular Weight: 87675.5 Isoelectric Point: 5.3596 |
| Chromosome | Chromosome/Scaffold: 17 Start: 630619 End: 639017 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH10 | 426 | 730 | 0 |
| ARHDFPFGTAMEWESVPTEKRSWYLERAKYHFNALVPEWSFKWPSVEPSKNNTAYRYGKLMSDHVQFAADNDFVMARGHTLEWLIPSPSFGDHWSRLDGC DAYRTYLETRIRREVTNFKGKFNSYDVFNEIIHDRDFVENCPGMWPAILYDGFRWAHEADPTARLCLNDYGLITGDDWQAMITYVSGMLQQGVPINCIGV QAYVPLTNRPSTAYMRTRLEALAGLGLDIVITEFNFWTSWASSGNPVWEGTDAEHAALYEEYVPFWFSVPYIKGIMMWNFWDGSNWITNGGIYRLDGTPK ASALA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 796 Download |
| MTAGNVYTAC VWLRAAATLG GAGTVSFSLL TTNTYETLGW AGTNVGTNWT QLCMRNIVLN 60 VSAVTYYTLD FGLNTGSVFV DDMNVTTGAM PSPSPPPSPS PIAAPPGDSL VLINTSFEAG 120 QQSWSTLVRN WACPCPQATF DFASSAAAYT GSKGVEVNVQ VPSDQGWHVQ LQSPRFNVSS 180 GQRYTVCVWL RAATVPLMTG SGKMSMSLLK TETYDGLGWA QATVTTSWAQ VCLADVLISI 240 NATVYVTIDL GTNTGIYHLD DFTAINGRSS GGISIPATNG PLTAPYSTSY ESGQANWIGS 300 KKNTSTASFN FSSSAAMRTG SNGVEIAVQV TPVWSQVCVM DFRPSRNTSA FFTLDLGRFV 360 GTVYVDDFTF TARSNYNPEE VTYVSSAAIA DRINAHRKGN LTFNFVNGTT GQPITQPVTR 420 LEVRLARHDF PFGTAMEWES VPTEKRSWYL ERAKYHFNAL VPEWSFKWPS VEPSKNNTAY 480 RYGKLMSDHV QFAADNDFVM ARGHTLEWLI PSPSFGDHWS RLDGCDAYRT YLETRIRREV 540 TNFKGKFNSY DVFNEIIHDR DFVENCPGMW PAILYDGFRW AHEADPTARL CLNDYGLITG 600 DDWQAMITYV SGMLQQGVPI NCIGVQAYVP LTNRPSTAYM RTRLEALAGL GLDIVITEFN 660 FWTSWASSGN PVWEGTDAEH AALYEEYVPF WFSVPYIKGI MMWNFWDGSN WITNGGIYRL 720 DGTPKASALA VGDMWNNRWR TNVALSNVVL PNGQATINGF YGKYNYTLEL DGRVFSGVMD 780 FPKNAGAQTV TISLA* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3693 | XynA | 4.0e-31 | 450 | 712 | 273 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| smart00633 | Glyco_10 | 3.0e-43 | 467 | 726 | 274 | + Glycosyl hydrolase family 10. | ||
| pfam00331 | Glyco_hydro_10 | 5.0e-47 | 425 | 716 | 301 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_682692.1 | 1.00053e-42 | 384 | 794 | 1 | 385 | putative endo-1,4-beta-xylanase [Thermosynechococcus elongatus BP-1] |
| RefSeq | YP_001820579.1 | 5e-38 | 390 | 764 | 30 | 392 | glycoside hydrolase family protein [Opitutus terrae PB90-1] |
| RefSeq | YP_003251054.1 | 0 | 392 | 765 | 188 | 536 | glycoside hydrolase family 10 [Fibrobacter succinogenes subsp. succinogenes S85] |
| RefSeq | YP_678710.1 | 0 | 328 | 795 | 134 | 580 | xylanase [Cytophaga hutchinsonii ATCC 33406] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vbu_B | 3e-25 | 449 | 712 | 34 | 290 | A Chain A, Crystal Structure Of The Third Repeat Domain Of Reelin |
| PDB | 1vbu_A | 3e-25 | 449 | 712 | 34 | 290 | A Chain A, Crystal Structure Of The Third Repeat Domain Of Reelin |
| PDB | 1vbr_B | 3e-25 | 449 | 712 | 34 | 290 | A Chain A, Crystal Structure Of Complex Xylanase 10b From Thermotoga Maritima With Xylobiose |
| PDB | 1vbr_A | 3e-25 | 449 | 712 | 34 | 290 | A Chain A, Crystal Structure Of Complex Xylanase 10b From Thermotoga Maritima With Xylobiose |
| PDB | 1nq6_A | 8e-25 | 456 | 722 | 36 | 287 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FD817202 | 248 | 488 | 735 | 0 |
| FD830401 | 127 | 671 | 794 | 5e-33 |
| FD832463 | 151 | 114 | 263 | 7e-29 |
| FD832463 | 85 | 1 | 85 | 0.000002 |
| FD832463 | 46 | 334 | 379 | 0.0002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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