| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20001959m |
| Family | GT5 |
| Protein Properties | Length: 714 Molecular Weight: 80121.1 Isoelectric Point: 9.623 |
| Chromosome | Chromosome/Scaffold: 25 Start: 1734176 End: 1746329 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 344 | 511 | 9.9e-28 |
| TSEVGYFHQQIRGVDFVFVDHPSYPRPGGLYADTHGVYGDNQFRFTLLCLAALEAPFFLELPLPPQQLDPPRSPSAAVAPLPNGNGDDNSNGTDAVPSSK YGQDVMFIANDWHASLVPVYLAAKYRPHGVYGNARCILAIHNLRHQGVFPPGTFASLDLPHQWYGCLE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 714 Download |
| MQRNLINNHH PVEYYERSFQ HQLLQVDGLS VSPKEPAKYL AMPWPQPAVG TPRTQFTTHN 60 LQAFFFQNAV TVPMKLEVRR LHIPATPVPP PPPAPPLRPP SLRPPAPQHR LQPPAPHRQQ 120 LCSPHRQQLC SPHRQQLTPS SVAGLTPLQD QMEPAPVSSR PQLMEGPEGN NVLEPATTPM 180 ASPAPSYRRT EEVPDTKPTP ATFRTPVASL CPHMEAGWEA STPIQPPLGT LKTFRWAGYK 240 LRLRTKRILV VAMYGDIGRC RGILCRRIIG LHIANRTRVQ SATHSARVLP LVRASVAAAP 300 PAITDVPGIE TTHDANVHGK SGAVEVEVPG LKRATELRNI IFVTSEVGYF HQQIRGVDFV 360 FVDHPSYPRP GGLYADTHGV YGDNQFRFTL LCLAALEAPF FLELPLPPQQ LDPPRSPSAA 420 VAPLPNGNGD DNSNGTDAVP SSKYGQDVMF IANDWHASLV PVYLAAKYRP HGVYGNARCI 480 LAIHNLRHQG VFPPGTFASL DLPHQWYGCL EWQYPPHQRQ GSWAEEGRSV NHLKVVGGWP 540 NHCRPHRNRV RGEWNPATDP HLPFKYDTTN FVEGKAKCKM ELQQQQQQQQ QQQQQQQQQQ 600 QQQQQEGVSG GLRQDFEGFV GLRVWGRGLP PYTFNLRSHN DSVLNAPKTV YGKWKLKGLL 660 HATGLALLTY QNHRDDFRKL QLRGMTREAS WDQAAQQYEQ IINWTFMDPP YCR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0.007 | 673 | 704 | 32 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0.002 | 670 | 701 | 32 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| pfam08323 | Glyco_transf_5 | 2.0e-23 | 331 | 512 | 184 | + Starch synthase catalytic domain. | ||
| TIGR02095 | glgA | 9.0e-24 | 346 | 579 | 265 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-29 | 346 | 582 | 267 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACY56162.1 | 0 | 346 | 585 | 205 | 439 | soluble starch synthase I [Oryza sativa Indica Group] |
| RefSeq | XP_001420930.1 | 0 | 346 | 585 | 74 | 310 | predicted protein [Ostreococcus lucimarinus CCE9901] |
| RefSeq | XP_001698697.1 | 0 | 322 | 585 | 135 | 389 | soluble starch synthase [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698697.1 | 2e-22 | 657 | 713 | 523 | 579 | soluble starch synthase [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 1e-26 | 347 | 585 | 77 | 318 | A Chain A, Wif Domain-Egf-Like Domain 1 Of Human Wnt Inhibitory Factor 1 In Complex With 1,2-Dipalmitoylphosphatidylcholine |
| PDB | 3vue_A | 1e-26 | 347 | 585 | 77 | 318 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0.0000002 | 356 | 583 | 76 | 281 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3cx4_A | 0.0000003 | 356 | 583 | 76 | 281 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3cop_A | 0.0000003 | 356 | 583 | 76 | 281 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GW227534 | 196 | 339 | 534 | 0 |
| EX379432 | 269 | 346 | 582 | 0 |
| HO442390 | 274 | 344 | 582 | 9.80909e-45 |
| GW221047 | 174 | 441 | 582 | 7.00649e-44 |
| GW221917 | 171 | 444 | 582 | 2.99878e-43 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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